Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18m05
         (179 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031024-3|CAA19832.1|  308|Drosophila melanogaster EG:196F3.2 p...    27   3.5  
AY051771-1|AAK93195.1|  511|Drosophila melanogaster LD29844p pro...    27   4.6  
AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE...    27   4.6  
AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB...    27   4.6  
AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD...    27   4.6  
AE014297-651|AAF54149.3|  511|Drosophila melanogaster CG2993-PA ...    27   4.6  

>AL031024-3|CAA19832.1|  308|Drosophila melanogaster EG:196F3.2
           protein.
          Length = 308

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 126 TIILMPPLWPACCLKKVC 179
           T I   PLWP C L +VC
Sbjct: 283 TAIRFSPLWPFCALYEVC 300


>AY051771-1|AAK93195.1|  511|Drosophila melanogaster LD29844p
           protein.
          Length = 511

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 14  CPLCXVESLHFNVYXINRNVVDVIKCSV 97
           C     + +HF +Y  N + +D+I+C V
Sbjct: 186 CGYAPGQKIHFVLYINNESSIDIIECEV 213


>AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE,
            isoform E protein.
          Length = 2832

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 179  TDFFQTTRWPKRRHQNYRLFYSIVRHSSR 93
            +D    T W +R H+  + F++ +RH +R
Sbjct: 966  SDTHSMTMWAERNHRMMQCFFNNIRHYAR 994


>AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB,
           isoform B protein.
          Length = 3703

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 179 TDFFQTTRWPKRRHQNYRLFYSIVRHSSR 93
           +D    T W +R H+  + F++ +RH +R
Sbjct: 757 SDTHSMTMWAERNHRMMQCFFNNIRHYAR 785


>AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD,
            isoform D protein.
          Length = 3912

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 179  TDFFQTTRWPKRRHQNYRLFYSIVRHSSR 93
            +D    T W +R H+  + F++ +RH +R
Sbjct: 966  SDTHSMTMWAERNHRMMQCFFNNIRHYAR 994


>AE014297-651|AAF54149.3|  511|Drosophila melanogaster CG2993-PA
           protein.
          Length = 511

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 14  CPLCXVESLHFNVYXINRNVVDVIKCSV 97
           C     + +HF +Y  N + +D+I+C V
Sbjct: 186 CGYAPGQKIHFVLYINNESSIDIIECEV 213


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,633,841
Number of Sequences: 53049
Number of extensions: 102695
Number of successful extensions: 241
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 24,988,368
effective HSP length: 40
effective length of database: 22,866,408
effective search space used: 434461752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)