Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18m05
         (179 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   3.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   3.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    19   4.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    19   5.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    19   5.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   5.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          18   9.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      18   9.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    18   9.6  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -1

Query: 173 FFQTTRWPKRRHQNYRLFYSI 111
           FF+T  W K      +  YS+
Sbjct: 124 FFKTALWAKNNINEAQYIYSL 144


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -1

Query: 173 FFQTTRWPKRRHQNYRLFYSI 111
           FF+T  W K      +  YS+
Sbjct: 124 FFKTALWAKNNINEAQYIYSL 144


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 179 TDFFQTTRWP 150
           T  + TTRWP
Sbjct: 773 TSNYSTTRWP 782


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 157 AGQRGGIKIIVYFIP 113
           A    G+KII+ F+P
Sbjct: 108 AAHEKGLKIILDFVP 122


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 176 DFFQTTRWPKRRHQNYRLFYSIVRHSS 96
           D F T    K   +N  LF+ +V +S+
Sbjct: 301 DIFNTQSSAKVMSKNGVLFFGLVNNSA 327


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 157 AGQRGGIKIIVYFIP 113
           A    G+KII+ F+P
Sbjct: 108 AAHEKGLKIILDFVP 122


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 101 SVAQWNKINDNFDAASLASVLFEKSL 178
           S A+W  +  N+D  S   +  +K++
Sbjct: 52  SDAEWYDVGRNYDMESNMDMYKDKNV 77


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 101 SVAQWNKINDNFDAASLASVLFEKSL 178
           S A+W  +  N+D  S   +  +K++
Sbjct: 52  SDAEWYDVGRNYDMESNMDMYKDKNV 77


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 11/34 (32%), Positives = 13/34 (38%)
 Frame = +2

Query: 8   IPCPLCXVESLHFNVYXINRNVVDVIKCSVTSVA 109
           I CP   V   HF      R V  + +   T VA
Sbjct: 189 ISCPEISVNFAHFPATPTGREVALIEQTIGTCVA 222


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,950
Number of Sequences: 438
Number of extensions: 614
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used:  2585220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)