Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18m01
         (237 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    22   3.5  
AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450 pr...    22   3.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            21   4.6  

>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = -3

Query: 142 SYQNVASAMSRSKRQCFRPINALNLKVKRVIN*MSE 35
           S + + ++++ S+R C RP   + ++  +  + MSE
Sbjct: 569 SMRTLTTSLTVSRRSCLRPARVVIVERPKTEHAMSE 604


>AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 186 SCIIFHCYYKSKISEAIKMLLQQCHVANV 100
           S  + +C Y+  ++EAI+   ++C V  V
Sbjct: 311 STTMSYCLYELALNEAIQQRARECVVEAV 339


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 163 ITVKYNARTFFDIVLDIQKLNVK 231
           +TV  NA      VLD QKLN+K
Sbjct: 907 VTVYQNAIVIRVPVLDGQKLNLK 929


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,933
Number of Sequences: 2352
Number of extensions: 2707
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11483550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)