Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18m01
         (237 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC051863-1|AAH51863.1|  835|Homo sapiens family with sequence si...    28   4.6  
AL645992-2|CAH70757.1|  558|Homo sapiens novel protein protein.        28   4.6  
AL645992-1|CAH70756.1|  835|Homo sapiens novel protein protein.        28   4.6  
AK022978-1|BAB14342.1|  835|Homo sapiens protein ( Homo sapiens ...    28   4.6  
AB023170-1|BAA76797.1|  789|Homo sapiens KIAA0953 protein protein.     28   6.1  

>BC051863-1|AAH51863.1|  835|Homo sapiens family with sequence
           similarity 35, member A protein.
          Length = 835

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 198 IKKCSCIIFHCYYKSKISEAIKMLLQQCHVANVNV 94
           IKK S +I +C  KS+    + M+L  CHV  +N+
Sbjct: 426 IKKTS-LIKNCDSKSQKYNCLVMVLSPCHVKEINI 459


>AL645992-2|CAH70757.1|  558|Homo sapiens novel protein protein.
          Length = 558

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 198 IKKCSCIIFHCYYKSKISEAIKMLLQQCHVANVNV 94
           IKK S +I +C  KS+    + M+L  CHV  +N+
Sbjct: 80  IKKTS-LIKNCDSKSQKYNCLVMVLSPCHVKEINI 113


>AL645992-1|CAH70756.1|  835|Homo sapiens novel protein protein.
          Length = 835

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 198 IKKCSCIIFHCYYKSKISEAIKMLLQQCHVANVNV 94
           IKK S +I +C  KS+    + M+L  CHV  +N+
Sbjct: 426 IKKTS-LIKNCDSKSQKYNCLVMVLSPCHVKEINI 459


>AK022978-1|BAB14342.1|  835|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12916 fis, clone NT2RP2004551. ).
          Length = 835

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 198 IKKCSCIIFHCYYKSKISEAIKMLLQQCHVANVNV 94
           IKK S +I +C  KS+    + M+L  CHV  +N+
Sbjct: 426 IKKTS-LIKNCDSKSQKYNCLVMVLSPCHVKEINI 459


>AB023170-1|BAA76797.1|  789|Homo sapiens KIAA0953 protein protein.
          Length = 789

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 144 EAIKMLLQQCHVANVNVFVQS 82
           EA+  LL  CH  ++N+FV+S
Sbjct: 139 EALDQLLMACHCQSINLFVES 159


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,430,102
Number of Sequences: 237096
Number of extensions: 325984
Number of successful extensions: 594
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 76,859,062
effective HSP length: 57
effective length of database: 63,344,590
effective search space used: 1330236390
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)