BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18l04
(551 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075332-1|AAL68199.1| 217|Drosophila melanogaster GH11940p pro... 153 2e-37
AF017783-1|AAB97513.1| 217|Drosophila melanogaster alpha NAC pr... 153 2e-37
AE013599-1584|AAM68654.1| 217|Drosophila melanogaster CG8759-PC... 153 2e-37
AE013599-1583|AAF58457.1| 217|Drosophila melanogaster CG8759-PB... 153 2e-37
AE013599-1582|AAM68653.1| 217|Drosophila melanogaster CG8759-PA... 153 2e-37
Y08969-1|CAA70166.1| 217|Drosophila melanogaster Nascent polype... 150 1e-36
BT012499-1|AAS93770.1| 347|Drosophila melanogaster GH09281p pro... 93 2e-19
AY089219-1|AAL89957.1| 340|Drosophila melanogaster AT01837p pro... 93 2e-19
AE014134-190|AAF51428.2| 347|Drosophila melanogaster CG4415-PA ... 93 2e-19
AY070860-1|AAL48482.1| 169|Drosophila melanogaster GM13744p pro... 32 0.59
AF160890-1|AAD46830.1| 169|Drosophila melanogaster BcDNA.GM0532... 32 0.59
AF151116-1|AAF06076.1| 169|Drosophila melanogaster beta NAC hom... 32 0.59
AE013599-1596|AAM68610.1| 169|Drosophila melanogaster CG3644-PB... 32 0.59
AE013599-1595|AAF58449.1| 169|Drosophila melanogaster CG3644-PA... 32 0.59
AE014134-126|AAF51481.1| 795|Drosophila melanogaster CG11835-PA... 31 1.4
AE014298-1999|AAF48342.2| 261|Drosophila melanogaster CG13402-P... 29 3.2
AY089364-1|AAL90102.1| 262|Drosophila melanogaster AT18706p pro... 29 4.2
AE014297-3531|AAN13993.1| 1558|Drosophila melanogaster CG6454-PB... 29 5.5
AE014296-1811|AAF50161.3| 391|Drosophila melanogaster CG14157-P... 29 5.5
>AY075332-1|AAL68199.1| 217|Drosophila melanogaster GH11940p
protein.
Length = 217
Score = 153 bits (371), Expect = 2e-37
Identities = 89/143 (62%), Positives = 98/143 (68%), Gaps = 9/143 (6%)
Frame = +2
Query: 149 MPELTELDKATASMT------EKRKEETAXXXXXXXXNIPELEDAGAPDA---GGITNPI 301
MPELTE+ A T E + E +P LE+A A GG T
Sbjct: 1 MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGGGATG-- 58
Query: 302 AGIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSD 481
ID+VSK+KQSRGEKKARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSD
Sbjct: 59 LPIDLVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSD 118
Query: 482 TYIVFGEAKIEDLSTQATMAAAE 550
TYIVFGEAKIEDLS QA +AAAE
Sbjct: 119 TYIVFGEAKIEDLSQQAQVAAAE 141
>AF017783-1|AAB97513.1| 217|Drosophila melanogaster alpha NAC
protein.
Length = 217
Score = 153 bits (371), Expect = 2e-37
Identities = 89/143 (62%), Positives = 98/143 (68%), Gaps = 9/143 (6%)
Frame = +2
Query: 149 MPELTELDKATASMT------EKRKEETAXXXXXXXXNIPELEDAGAPDA---GGITNPI 301
MPELTE+ A T E + E +P LE+A A GG T
Sbjct: 1 MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGGGATG-- 58
Query: 302 AGIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSD 481
ID+VSK+KQSRGEKKARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSD
Sbjct: 59 LPIDLVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSD 118
Query: 482 TYIVFGEAKIEDLSTQATMAAAE 550
TYIVFGEAKIEDLS QA +AAAE
Sbjct: 119 TYIVFGEAKIEDLSQQAQVAAAE 141
>AE013599-1584|AAM68654.1| 217|Drosophila melanogaster CG8759-PC,
isoform C protein.
Length = 217
Score = 153 bits (371), Expect = 2e-37
Identities = 89/143 (62%), Positives = 98/143 (68%), Gaps = 9/143 (6%)
Frame = +2
Query: 149 MPELTELDKATASMT------EKRKEETAXXXXXXXXNIPELEDAGAPDA---GGITNPI 301
MPELTE+ A T E + E +P LE+A A GG T
Sbjct: 1 MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGGGATG-- 58
Query: 302 AGIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSD 481
ID+VSK+KQSRGEKKARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSD
Sbjct: 59 LPIDLVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSD 118
Query: 482 TYIVFGEAKIEDLSTQATMAAAE 550
TYIVFGEAKIEDLS QA +AAAE
Sbjct: 119 TYIVFGEAKIEDLSQQAQVAAAE 141
>AE013599-1583|AAF58457.1| 217|Drosophila melanogaster CG8759-PB,
isoform B protein.
Length = 217
Score = 153 bits (371), Expect = 2e-37
Identities = 89/143 (62%), Positives = 98/143 (68%), Gaps = 9/143 (6%)
Frame = +2
Query: 149 MPELTELDKATASMT------EKRKEETAXXXXXXXXNIPELEDAGAPDA---GGITNPI 301
MPELTE+ A T E + E +P LE+A A GG T
Sbjct: 1 MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGGGATG-- 58
Query: 302 AGIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSD 481
ID+VSK+KQSRGEKKARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSD
Sbjct: 59 LPIDLVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSD 118
Query: 482 TYIVFGEAKIEDLSTQATMAAAE 550
TYIVFGEAKIEDLS QA +AAAE
Sbjct: 119 TYIVFGEAKIEDLSQQAQVAAAE 141
>AE013599-1582|AAM68653.1| 217|Drosophila melanogaster CG8759-PA,
isoform A protein.
Length = 217
Score = 153 bits (371), Expect = 2e-37
Identities = 89/143 (62%), Positives = 98/143 (68%), Gaps = 9/143 (6%)
Frame = +2
Query: 149 MPELTELDKATASMT------EKRKEETAXXXXXXXXNIPELEDAGAPDA---GGITNPI 301
MPELTE+ A T E + E +P LE+A A GG T
Sbjct: 1 MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGGGATG-- 58
Query: 302 AGIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSD 481
ID+VSK+KQSRGEKKARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSD
Sbjct: 59 LPIDLVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSD 118
Query: 482 TYIVFGEAKIEDLSTQATMAAAE 550
TYIVFGEAKIEDLS QA +AAAE
Sbjct: 119 TYIVFGEAKIEDLSQQAQVAAAE 141
>Y08969-1|CAA70166.1| 217|Drosophila melanogaster Nascent
polypeptide associatedcomplex protein alpha subunit
protein.
Length = 217
Score = 150 bits (363), Expect = 1e-36
Identities = 86/142 (60%), Positives = 97/142 (68%), Gaps = 8/142 (5%)
Frame = +2
Query: 149 MPELTELDKATASMT------EKRKEETAXXXXXXXXNIPELEDA--GAPDAGGITNPIA 304
MPELTE+ A T E + E +P LE+A GG +
Sbjct: 1 MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVPATTQLGGGATGLP 60
Query: 305 GIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDT 484
ID+VSK+KQSRGEKKARKIM KLGLK +QGV RVTIRKSKNILFVIN+P+VYKNPHSDT
Sbjct: 61 -IDLVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPNVYKNPHSDT 119
Query: 485 YIVFGEAKIEDLSTQATMAAAE 550
YIVFGEAKIEDLS QA +AAAE
Sbjct: 120 YIVFGEAKIEDLSQQAQVAAAE 141
>BT012499-1|AAS93770.1| 347|Drosophila melanogaster GH09281p
protein.
Length = 347
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/92 (51%), Positives = 61/92 (66%)
Frame = +2
Query: 272 PDAGGITNPIAGIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINS 451
PD G +A + SKQSRGE+KAR+I+ KL LKP++ V RVT++K KNIL I+
Sbjct: 169 PDEQGQLGTVA-VRTREVSKQSRGERKARRILMKLDLKPMENVARVTMKKGKNILLYIDQ 227
Query: 452 PDVYKNPHSDTYIVFGEAKIEDLSTQATMAAA 547
PDVY+ HS TYI FGE +ED ST + + A
Sbjct: 228 PDVYRVAHSSTYIFFGEICVEDTSTTSVASQA 259
>AY089219-1|AAL89957.1| 340|Drosophila melanogaster AT01837p
protein.
Length = 340
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/92 (51%), Positives = 61/92 (66%)
Frame = +2
Query: 272 PDAGGITNPIAGIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINS 451
PD G +A + SKQSRGE+KAR+I+ KL LKP++ V RVT++K KNIL I+
Sbjct: 162 PDEQGQLGTVA-VRTREVSKQSRGERKARRILMKLDLKPMENVARVTMKKGKNILLYIDQ 220
Query: 452 PDVYKNPHSDTYIVFGEAKIEDLSTQATMAAA 547
PDVY+ HS TYI FGE +ED ST + + A
Sbjct: 221 PDVYRVAHSSTYIFFGEICVEDTSTTSVASQA 252
>AE014134-190|AAF51428.2| 347|Drosophila melanogaster CG4415-PA
protein.
Length = 347
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/92 (51%), Positives = 61/92 (66%)
Frame = +2
Query: 272 PDAGGITNPIAGIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINS 451
PD G +A + SKQSRGE+KAR+I+ KL LKP++ V RVT++K KNIL I+
Sbjct: 169 PDEQGQLGTVA-VRTREVSKQSRGERKARRILMKLDLKPMENVARVTMKKGKNILLYIDQ 227
Query: 452 PDVYKNPHSDTYIVFGEAKIEDLSTQATMAAA 547
PDVY+ HS TYI FGE +ED ST + + A
Sbjct: 228 PDVYRVAHSSTYIFFGEICVEDTSTTSVASQA 259
>AY070860-1|AAL48482.1| 169|Drosophila melanogaster GM13744p
protein.
Length = 169
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +2
Query: 326 SKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEA 505
S + +KK + + KL + + G+E V I K+ + N+P + ++T+ + G
Sbjct: 30 STPATDDKKLQSSLKKLSVNTIPGIEEVNIIKNDGTVIHFNNPKAQASLPTNTFAITGHG 89
Query: 506 K 508
+
Sbjct: 90 E 90
>AF160890-1|AAD46830.1| 169|Drosophila melanogaster BcDNA.GM05329
protein.
Length = 169
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +2
Query: 326 SKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEA 505
S + +KK + + KL + + G+E V I K+ + N+P + ++T+ + G
Sbjct: 30 STPATDDKKLQSSLKKLSVNTIPGIEEVNIIKNDGTVIHFNNPKAQASLPTNTFAITGHG 89
Query: 506 K 508
+
Sbjct: 90 E 90
>AF151116-1|AAF06076.1| 169|Drosophila melanogaster beta NAC
homolog protein.
Length = 169
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +2
Query: 326 SKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEA 505
S + +KK + + KL + + G+E V I K+ + N+P + ++T+ + G
Sbjct: 30 STPATDDKKLQSSLKKLSVNTIPGIEEVNIIKNDGTVIHFNNPKAQASLPTNTFAITGHG 89
Query: 506 K 508
+
Sbjct: 90 E 90
>AE013599-1596|AAM68610.1| 169|Drosophila melanogaster CG3644-PB,
isoform B protein.
Length = 169
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +2
Query: 326 SKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEA 505
S + +KK + + KL + + G+E V I K+ + N+P + ++T+ + G
Sbjct: 30 STPATDDKKLQSSLKKLSVNTIPGIEEVNIIKNDGTVIHFNNPKAQASLPTNTFAITGHG 89
Query: 506 K 508
+
Sbjct: 90 E 90
>AE013599-1595|AAF58449.1| 169|Drosophila melanogaster CG3644-PA,
isoform A protein.
Length = 169
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +2
Query: 326 SKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEA 505
S + +KK + + KL + + G+E V I K+ + N+P + ++T+ + G
Sbjct: 30 STPATDDKKLQSSLKKLSVNTIPGIEEVNIIKNDGTVIHFNNPKAQASLPTNTFAITGHG 89
Query: 506 K 508
+
Sbjct: 90 E 90
>AE014134-126|AAF51481.1| 795|Drosophila melanogaster CG11835-PA
protein.
Length = 795
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 344 EKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAK 508
+KK + + KL + + G+E V I K + N+P + ++T+ V G +
Sbjct: 36 DKKLQSSLKKLSVSTIPGIEEVNIIKDDLTVIHFNNPKAQASLSANTFAVTGHGE 90
>AE014298-1999|AAF48342.2| 261|Drosophila melanogaster CG13402-PA
protein.
Length = 261
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 344 EKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGE 502
EK+ + ++ L LK + +E VTI + + V+ P V + ++V G+
Sbjct: 35 EKRVQATLAMLPLKNIDEIEEVTIEFTNSSKVVLTMPRVQSTAGNSFFVVSGD 87
>AY089364-1|AAL90102.1| 262|Drosophila melanogaster AT18706p
protein.
Length = 262
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 344 EKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGE 502
EK+ + ++ L LK + ++ VTI + + V+ P V P + ++V G+
Sbjct: 35 EKRVQAELAMLPLKTIGEIQEVTIEFTNSREVVLTMPKVQGTPPNSFFVVSGD 87
>AE014297-3531|AAN13993.1| 1558|Drosophila melanogaster CG6454-PB,
isoform B protein.
Length = 1558
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 435 SLSLTHLMYTRILIQTPTLFLVKPRLKICPHRP 533
S SL HL+ + TL L P L++CP P
Sbjct: 612 SASLNHLVAPDTPVPPNTLLLKAPELRVCPSTP 644
>AE014296-1811|AAF50161.3| 391|Drosophila melanogaster CG14157-PA
protein.
Length = 391
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 465 LYTSGELMTKRMFFDFLIVTLSTPCTGLRPSLLIIFL 355
LYT TK+++ L V LST C GL ++ IF+
Sbjct: 255 LYTRMLQTTKKIYSIVLFVQLSTTCVGLLCTISCIFM 291
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,993,150
Number of Sequences: 53049
Number of extensions: 376229
Number of successful extensions: 807
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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