Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18l02
         (247 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ093962-1|AAY88738.1|  648|Homo sapiens zinc finger protein 202...    28   4.8  
BC013382-1|AAH13382.1|  648|Homo sapiens zinc finger protein 202...    28   4.8  
AL162031-1|CAB82384.1|  634|Homo sapiens hypothetical protein pr...    28   4.8  
AJ276177-1|CAC21447.1|  648|Homo sapiens zinc finger protein hom...    28   4.8  
AF027219-1|AAC79941.1|  648|Homo sapiens ZNF202 beta protein.          28   4.8  

>DQ093962-1|AAY88738.1|  648|Homo sapiens zinc finger protein 202
           protein.
          Length = 648

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 95  ILRLKTLCELWFYPDRDLKPCICSPLLFLDDLLIVYEDE 211
           ++RL+ LC  W  P+R  K  I   LL L+  L V   E
Sbjct: 64  LIRLRELCHQWLRPERRTKEQILE-LLVLEQFLTVLPGE 101


>BC013382-1|AAH13382.1|  648|Homo sapiens zinc finger protein 202
           protein.
          Length = 648

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 95  ILRLKTLCELWFYPDRDLKPCICSPLLFLDDLLIVYEDE 211
           ++RL+ LC  W  P+R  K  I   LL L+  L V   E
Sbjct: 64  LIRLRELCHQWLRPERRTKEQILE-LLVLEQFLTVLPGE 101


>AL162031-1|CAB82384.1|  634|Homo sapiens hypothetical protein
           protein.
          Length = 634

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 95  ILRLKTLCELWFYPDRDLKPCICSPLLFLDDLLIVYEDE 211
           ++RL+ LC  W  P+R  K  I   LL L+  L V   E
Sbjct: 50  LIRLRELCHQWLRPERRTKEQILE-LLVLEQFLTVLPGE 87


>AJ276177-1|CAC21447.1|  648|Homo sapiens zinc finger protein
           homolog protein.
          Length = 648

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 95  ILRLKTLCELWFYPDRDLKPCICSPLLFLDDLLIVYEDE 211
           ++RL+ LC  W  P+R  K  I   LL L+  L V   E
Sbjct: 64  LIRLRELCHQWLRPERRTKEQILE-LLVLEQFLTVLPGE 101


>AF027219-1|AAC79941.1|  648|Homo sapiens ZNF202 beta protein.
          Length = 648

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 95  ILRLKTLCELWFYPDRDLKPCICSPLLFLDDLLIVYEDE 211
           ++RL+ LC  W  P+R  K  I   LL L+  L V   E
Sbjct: 64  LIRLRELCHQWLRPERRTKEQILE-LLVLEQFLTVLPGE 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,422,811
Number of Sequences: 237096
Number of extensions: 377823
Number of successful extensions: 695
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 76,859,062
effective HSP length: 59
effective length of database: 62,870,398
effective search space used: 1383148756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)