Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18l02
         (247 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   1.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    20   3.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   5.2  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          20   5.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   5.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    19   6.9  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    19   6.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   6.9  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +2

Query: 95  ILRLKTLCELWFYPDR--DLKPCICSPLLFLDDLLIVYEDE 211
           ++ L TLC + +   R  D+  C+    L LDD+  + EDE
Sbjct: 5   VILLFTLCIVSYMMVRCDDITLCLKQENLNLDDIDSLLEDE 45


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 8/36 (22%), Positives = 20/36 (55%)
 Frame = -3

Query: 245 FFLNIYIILYFLHLHTQLVNHLKIAKESIYTVLNLG 138
           ++ N+Y   +  + +TQ+ N +   ++  Y+V  +G
Sbjct: 717 YYANLYTKYHGQYPNTQIQNPVGQGQDMTYSVQGVG 752


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 5.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 143 DLKPCICSPLLFLDDLL 193
           D  P IC  + FLD+ L
Sbjct: 223 DALPYICEDMRFLDEPL 239


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 19.8 bits (39), Expect = 5.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 212 LHLHTQLVNHL 180
           LH HT +V HL
Sbjct: 104 LHPHTAMVTHL 114


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 5.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 143 DLKPCICSPLLFLDDLL 193
           D  P IC  + FLD+ L
Sbjct: 223 DALPYICEDMRFLDEPL 239


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 69  YFTFINNVSYYD 104
           Y  F+N  +YYD
Sbjct: 134 YSAFVNLTAYYD 145


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 165 EHIHGFKSRSG*NHNSHNVFSRSMKR 88
           E +H  K +      SH  +SRS +R
Sbjct: 253 EKLHNEKEKFLEERTSHKRYSRSRER 278


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +2

Query: 137 DRDLKPCICSPLLFLDDLL 193
           +++++  +  PLL L+DL+
Sbjct: 707 EKEVEKALLKPLLSLEDLV 725


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,549
Number of Sequences: 438
Number of extensions: 745
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4275738
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)