Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18l01
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81028-2|CAB02694.1| 996|Caenorhabditis elegans Hypothetical pr... 168 3e-42
U18546-1|AAB02615.1| 996|Caenorhabditis elegans Na,K-ATPase alp... 168 3e-42
Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical pr... 130 1e-30
Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical p... 130 1e-30
AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical... 52 4e-07
AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp... 44 8e-05
AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation transp... 44 8e-05
AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical... 44 8e-05
AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical... 44 8e-05
U61957-3|AAX55702.1| 395|Caenorhabditis elegans Temporarily ass... 29 4.1
U61957-2|AAX55703.1| 386|Caenorhabditis elegans Temporarily ass... 29 4.1
Z81479-9|CAE17735.1| 215|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF016424-6|AAB65333.1| 366|Caenorhabditis elegans Transforming ... 28 5.5
Z83230-10|CAL22704.2| 714|Caenorhabditis elegans Hypothetical p... 28 7.2
Z78542-5|CAB01748.1| 915|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL021483-4|CAE46681.1| 139|Caenorhabditis elegans Hypothetical ... 28 7.2
AL021481-9|CAA16332.3| 714|Caenorhabditis elegans Hypothetical ... 28 7.2
U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical pr... 27 9.6
>Z81028-2|CAB02694.1| 996|Caenorhabditis elegans Hypothetical
protein B0365.3 protein.
Length = 996
Score = 168 bits (409), Expect = 3e-42
Identities = 74/120 (61%), Positives = 94/120 (78%)
Frame = +2
Query: 332 DLEDLKQELDIDYHKVTPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWV 511
+L DLKQE+ +D H V EEL R T+ E GL+ KA+E L ++GPNAL+PP+ TPEW+
Sbjct: 9 ELHDLKQEVKMDEHIVPIEELVARLGTNLETGLTRQKAQEVLAKNGPNALSPPETTPEWI 68
Query: 512 KFCKNLFGGFALLLWIGAILCFIAYGIQASTVEEPADDNLYLGIVLAAVVIVTGIFSYYQ 691
KFCKNLFGGFA+LLW+GAILC+IAY + T+E P+ DNLYLGIVL VV++TG+F YYQ
Sbjct: 69 KFCKNLFGGFAMLLWVGAILCYIAYSVDYFTMEYPSKDNLYLGIVLMTVVVITGVFQYYQ 128
>U18546-1|AAB02615.1| 996|Caenorhabditis elegans Na,K-ATPase alpha
subunit protein.
Length = 996
Score = 168 bits (409), Expect = 3e-42
Identities = 74/120 (61%), Positives = 94/120 (78%)
Frame = +2
Query: 332 DLEDLKQELDIDYHKVTPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWV 511
+L DLKQE+ +D H V EEL R T+ E GL+ KA+E L ++GPNAL+PP+ TPEW+
Sbjct: 9 ELHDLKQEVKMDEHIVPIEELVARLGTNLETGLTRQKAQEVLAKNGPNALSPPETTPEWI 68
Query: 512 KFCKNLFGGFALLLWIGAILCFIAYGIQASTVEEPADDNLYLGIVLAAVVIVTGIFSYYQ 691
KFCKNLFGGFA+LLW+GAILC+IAY + T+E P+ DNLYLGIVL VV++TG+F YYQ
Sbjct: 69 KFCKNLFGGFAMLLWVGAILCYIAYSVDYFTMEYPSKDNLYLGIVLMTVVVITGVFQYYQ 128
>Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical
protein C01G12.8 protein.
Length = 1049
Score = 130 bits (313), Expect = 1e-30
Identities = 59/121 (48%), Positives = 82/121 (67%), Gaps = 2/121 (1%)
Frame = +2
Query: 335 LEDLKQELDIDYHKVTPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVK 514
LEDLK+++ ID H++ + L++R+ T +NG+S A+A L RDGPNALTPPKQT +W+K
Sbjct: 48 LEDLKKDVVIDDHEIPLDALFKRYTTSEKNGISEAEATNRLNRDGPNALTPPKQTSKWIK 107
Query: 515 FCKNLFGGFALLLWIGAILCFIAYG--IQASTVEEPADDNLYLGIVLAAVVIVTGIFSYY 688
++FGGF LLW A + YG + S EE DN+Y+ I+LA VV VTG+F +Y
Sbjct: 108 LAGSIFGGFNFLLWCAASASAVGYGMDLSMSDDEEVPKDNMYMAIILATVVTVTGLFDFY 167
Query: 689 Q 691
Q
Sbjct: 168 Q 168
>Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical
protein C01G12.8 protein.
Length = 1049
Score = 130 bits (313), Expect = 1e-30
Identities = 59/121 (48%), Positives = 82/121 (67%), Gaps = 2/121 (1%)
Frame = +2
Query: 335 LEDLKQELDIDYHKVTPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVK 514
LEDLK+++ ID H++ + L++R+ T +NG+S A+A L RDGPNALTPPKQT +W+K
Sbjct: 48 LEDLKKDVVIDDHEIPLDALFKRYTTSEKNGISEAEATNRLNRDGPNALTPPKQTSKWIK 107
Query: 515 FCKNLFGGFALLLWIGAILCFIAYG--IQASTVEEPADDNLYLGIVLAAVVIVTGIFSYY 688
++FGGF LLW A + YG + S EE DN+Y+ I+LA VV VTG+F +Y
Sbjct: 108 LAGSIFGGFNFLLWCAASASAVGYGMDLSMSDDEEVPKDNMYMAIILATVVTVTGLFDFY 167
Query: 689 Q 691
Q
Sbjct: 168 Q 168
>AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical
protein C09H5.2b protein.
Length = 1039
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +2
Query: 425 GLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFALLLWIGAILCFIAYGIQAST 604
GL+ +A + L+ DG NAL+PPK F + +L++ A LCF+ Y
Sbjct: 66 GLTKQEAAQKLKTDGKNALSPPKTISNMELFVRQFKNLLWVLMFGAAALCFLTY------ 119
Query: 605 VEEPADD-NLYLGIVLAAVVIVTGIFSYYQ 691
+ +P D NLY+GI + A+V + + S+++
Sbjct: 120 IYDPTDALNLYVGIFIVAIVFIMCVVSFFE 149
>AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical
protein C09H5.2a protein.
Length = 1054
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +2
Query: 425 GLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFALLLWIGAILCFIAYGIQAST 604
GL+ +A + L+ DG NAL+PPK F + +L++ A LCF+ Y
Sbjct: 66 GLTKQEAAQKLKTDGKNALSPPKTISNMELFVRQFKNLLWVLMFGAAALCFLTY------ 119
Query: 605 VEEPADD-NLYLGIVLAAVVIVTGIFSYYQ 691
+ +P D NLY+GI + A+V + + S+++
Sbjct: 120 IYDPTDALNLYVGIFIVAIVFIMCVVSFFE 149
>AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical
protein C02E7.1 protein.
Length = 1050
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +2
Query: 425 GLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFALLLWIGAILCFIAYGIQAST 604
GLS A E LE DG NAL+PPK W F + +L++ A L +AY
Sbjct: 66 GLSKQVAAERLESDGRNALSPPKVISNWKLFLRQFKNLLWILMFGAAALSLVAY------ 119
Query: 605 VEEPAD-DNLYLGIVLAAVVIVTGIFSYYQ 691
+ +P+D NL +GI + ++ V I S+++
Sbjct: 120 IYDPSDLTNLCVGIFIIVIIFVMCIVSFFE 149
>AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1121
Score = 44.4 bits (100), Expect = 8e-05
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +2
Query: 422 NGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFG-GFALLLWIGAILCFIAYGIQ- 595
+GL +AK+ L+ G N + P Q P +F + F F +LL A+L + Y I
Sbjct: 90 DGLHSDEAKKRLKDGGLNQIDRP-QEPSLSRFFLSQFHFKFWILLLGAAVLSVMTYFIHM 148
Query: 596 ASTVEEPADDNLYLGIVLAAVVIVTGIFSYYQ 691
A EP NLY I+L AVV+ G+ SY+Q
Sbjct: 149 ARGFNEPL--NLYCAIILIAVVVFMGMLSYWQ 178
>AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1045
Score = 44.4 bits (100), Expect = 8e-05
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +2
Query: 422 NGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFG-GFALLLWIGAILCFIAYGIQ- 595
+GL +AK+ L+ G N + P Q P +F + F F +LL A+L + Y I
Sbjct: 90 DGLHSDEAKKRLKDGGLNQIDRP-QEPSLSRFFLSQFHFKFWILLLGAAVLSVMTYFIHM 148
Query: 596 ASTVEEPADDNLYLGIVLAAVVIVTGIFSYYQ 691
A EP NLY I+L AVV+ G+ SY+Q
Sbjct: 149 ARGFNEPL--NLYCAIILIAVVVFMGMLSYWQ 178
>AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical
protein Y105E8A.12b protein.
Length = 1045
Score = 44.4 bits (100), Expect = 8e-05
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +2
Query: 422 NGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFG-GFALLLWIGAILCFIAYGIQ- 595
+GL +AK+ L+ G N + P Q P +F + F F +LL A+L + Y I
Sbjct: 90 DGLHSDEAKKRLKDGGLNQIDRP-QEPSLSRFFLSQFHFKFWILLLGAAVLSVMTYFIHM 148
Query: 596 ASTVEEPADDNLYLGIVLAAVVIVTGIFSYYQ 691
A EP NLY I+L AVV+ G+ SY+Q
Sbjct: 149 ARGFNEPL--NLYCAIILIAVVVFMGMLSYWQ 178
>AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical
protein Y105E8A.12a protein.
Length = 1121
Score = 44.4 bits (100), Expect = 8e-05
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +2
Query: 422 NGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFG-GFALLLWIGAILCFIAYGIQ- 595
+GL +AK+ L+ G N + P Q P +F + F F +LL A+L + Y I
Sbjct: 90 DGLHSDEAKKRLKDGGLNQIDRP-QEPSLSRFFLSQFHFKFWILLLGAAVLSVMTYFIHM 148
Query: 596 ASTVEEPADDNLYLGIVLAAVVIVTGIFSYYQ 691
A EP NLY I+L AVV+ G+ SY+Q
Sbjct: 149 ARGFNEPL--NLYCAIILIAVVVFMGMLSYWQ 178
>U61957-3|AAX55702.1| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 49, isoform a protein.
Length = 395
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 545 LLLWIGAILCFIAYGIQASTVEEPADDN 628
LL+WI A+L + +G+ +T E P D+N
Sbjct: 166 LLIWIMAVLVSLPHGLFHNTYEFPDDNN 193
>U61957-2|AAX55703.1| 386|Caenorhabditis elegans Temporarily
assigned gene nameprotein 49, isoform b protein.
Length = 386
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 545 LLLWIGAILCFIAYGIQASTVEEPADDN 628
LL+WI A+L + +G+ +T E P D+N
Sbjct: 166 LLIWIMAVLVSLPHGLFHNTYEFPDDNN 193
>Z81479-9|CAE17735.1| 215|Caenorhabditis elegans Hypothetical
protein C34F6.11 protein.
Length = 215
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 506 WVKFCKNLFGGF--ALLLWIGAILCFIAYGIQAST 604
W FC +++ F ALL ++G +LCF G+ ST
Sbjct: 57 WTFFCYSVYINFIFALLAFVGGVLCF-TLGLYYST 90
>AF016424-6|AAB65333.1| 366|Caenorhabditis elegans Transforming
growth factor betafamily protein 2 protein.
Length = 366
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 422 NGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLF 532
N SHA + L R PN+ TP K P + K LF
Sbjct: 307 NATSHAIVQSTLHRVRPNSTTPAKCAPSSLGSYKILF 343
>Z83230-10|CAL22704.2| 714|Caenorhabditis elegans Hypothetical
protein Y43F4B.3 protein.
Length = 714
Score = 27.9 bits (59), Expect = 7.2
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = +3
Query: 240 AACSFYPPVHRDLRKWARHAENLPRKNGNQEI*KISNRSWILITIKSLLRNSTKDFKRTR 419
+ C F PV + A ++ P+++ ++ KI S T K++ NS+KD K+T
Sbjct: 120 STCGFETPVGTKRKSKAADSQKPPKQS---KLRKIDEAS----TSKAV-DNSSKDGKKTT 171
Query: 420 KMALVMQKRKRT*KETAPMLLHHLNKHPNG 509
K A+ R+R+ P+ + + +G
Sbjct: 172 KPAVTQSNRRRSGLSLRPVPIETIFSESSG 201
>Z78542-5|CAB01748.1| 915|Caenorhabditis elegans Hypothetical
protein F20D1.6 protein.
Length = 915
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +2
Query: 341 DLKQELDIDYHKVTPEELYQRFQTHPENGLSHAKAKENLERD--GPNALTPPKQTPEWVK 514
DL L + H T +EL FQ N S K ++ E + G N PP WV
Sbjct: 338 DLNCALILGKH-YTQKELPNAFQKLTINSASEVKIGKHAETEDSGTNGPMPPALMKSWVN 396
Query: 515 FCKN 526
F N
Sbjct: 397 FIFN 400
>AL021483-4|CAE46681.1| 139|Caenorhabditis elegans Hypothetical
protein Y38H8A.7 protein.
Length = 139
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 375 KSLLRNSTKDFKRTRKMALVMQKRKRT*KETAPMLLHHLNKHPNG*SFVKIYSAALHC 548
+S +R DFK RK+A + K K P LLH + HPN + + L+C
Sbjct: 35 ESFVRTMDWDFKELRKIA---ENSKS--KTIPPELLHTFSVHPNSVNHQILQGRLLNC 87
>AL021481-9|CAA16332.3| 714|Caenorhabditis elegans Hypothetical
protein Y43F4B.3 protein.
Length = 714
Score = 27.9 bits (59), Expect = 7.2
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = +3
Query: 240 AACSFYPPVHRDLRKWARHAENLPRKNGNQEI*KISNRSWILITIKSLLRNSTKDFKRTR 419
+ C F PV + A ++ P+++ ++ KI S T K++ NS+KD K+T
Sbjct: 120 STCGFETPVGTKRKSKAADSQKPPKQS---KLRKIDEAS----TSKAV-DNSSKDGKKTT 171
Query: 420 KMALVMQKRKRT*KETAPMLLHHLNKHPNG 509
K A+ R+R+ P+ + + +G
Sbjct: 172 KPAVTQSNRRRSGLSLRPVPIETIFSESSG 201
>U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical
protein ZK682.2 protein.
Length = 506
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 560 GAILCFIA-YGIQASTVEEPADDNLYLGIVLAAVVIVTGIF 679
G I +A Y I A T + AD+ + V+AA+ +VTGIF
Sbjct: 422 GQIASSVAPYHIGAYTKQGTADEWKIVFAVIAAICVVTGIF 462
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,189,788
Number of Sequences: 27780
Number of extensions: 355826
Number of successful extensions: 964
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -