Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18k16
         (597 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031095-1|AAH31095.1|  464|Homo sapiens asparagine-linked glyco...    86   8e-17
BC004402-1|AAH04402.1|  464|Homo sapiens asparagine-linked glyco...    86   8e-17
AY359073-1|AAQ89432.1|  472|Homo sapiens mannosyltransferase pro...    86   8e-17
AK075373-1|BAC11576.1|  464|Homo sapiens rase).  protein.              86   8e-17
AB019038-1|BAA90748.1|  464|Homo sapiens beta-1,4 mannosyltransf...    86   8e-17

>BC031095-1|AAH31095.1|  464|Homo sapiens asparagine-linked
           glycosylation 1 homolog (S. cerevisiae,
           beta-1,4-mannosyltran protein.
          Length = 464

 Score = 86.2 bits (204), Expect = 8e-17
 Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = +3

Query: 240 GNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 419
           G   +    VVLGD+GRSPRMQYHALSLA +G  V ++ +  + P  E+L N  I ++ L
Sbjct: 29  GRAARHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGL 88

Query: 420 HPFE-LKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPV 572
              + L  GP V +Y  K + Q++ L++ L       Y+  QNPP +PS+ V
Sbjct: 89  TELQSLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAV 140


>BC004402-1|AAH04402.1|  464|Homo sapiens asparagine-linked
           glycosylation 1 homolog (S. cerevisiae,
           beta-1,4-mannosyltran protein.
          Length = 464

 Score = 86.2 bits (204), Expect = 8e-17
 Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = +3

Query: 240 GNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 419
           G   +    VVLGD+GRSPRMQYHALSLA +G  V ++ +  + P  E+L N  I ++ L
Sbjct: 29  GRAARHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGL 88

Query: 420 HPFE-LKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPV 572
              + L  GP V +Y  K + Q++ L++ L       Y+  QNPP +PS+ V
Sbjct: 89  TELQSLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAV 140


>AY359073-1|AAQ89432.1|  472|Homo sapiens mannosyltransferase
           protein.
          Length = 472

 Score = 86.2 bits (204), Expect = 8e-17
 Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = +3

Query: 240 GNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 419
           G   +    VVLGD+GRSPRMQYHALSLA +G  V ++ +  + P  E+L N  I ++ L
Sbjct: 37  GRAARHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGL 96

Query: 420 HPFE-LKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPV 572
              + L  GP V +Y  K + Q++ L++ L       Y+  QNPP +PS+ V
Sbjct: 97  TELQSLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAV 148


>AK075373-1|BAC11576.1|  464|Homo sapiens rase).  protein.
          Length = 464

 Score = 86.2 bits (204), Expect = 8e-17
 Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = +3

Query: 240 GNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 419
           G   +    VVLGD+GRSPRMQYHALSLA +G  V ++ +  + P  E+L N  I ++ L
Sbjct: 29  GRAARHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGL 88

Query: 420 HPFE-LKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPV 572
              + L  GP V +Y  K + Q++ L++ L       Y+  QNPP +PS+ V
Sbjct: 89  TELQSLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAV 140


>AB019038-1|BAA90748.1|  464|Homo sapiens beta-1,4
           mannosyltransferase protein.
          Length = 464

 Score = 86.2 bits (204), Expect = 8e-17
 Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = +3

Query: 240 GNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 419
           G   +    VVLGD+GRSPRMQYHALSLA +G  V ++ +  + P  E+L N  I ++ L
Sbjct: 29  GRAARHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGL 88

Query: 420 HPFE-LKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPV 572
              + L  GP V +Y  K + Q++ L++ L       Y+  QNPP +PS+ V
Sbjct: 89  TELQSLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAV 140


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,599,113
Number of Sequences: 237096
Number of extensions: 1877589
Number of successful extensions: 3120
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3113
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)