Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18k16
         (597 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118918-1|AAM50778.1|  446|Drosophila melanogaster LD22559p pro...   101   1e-21
AE014297-2416|AAF55475.1|  446|Drosophila melanogaster CG18012-P...   101   1e-21
BT001681-1|AAN71436.1|  168|Drosophila melanogaster RE56164p pro...    32   0.51 
AY089431-1|AAL90169.1|  358|Drosophila melanogaster AT25123p pro...    29   4.8  
AE013599-3548|AAF46960.2|  358|Drosophila melanogaster CG3215-PA...    28   8.4  

>AY118918-1|AAM50778.1|  446|Drosophila melanogaster LD22559p
           protein.
          Length = 446

 Score =  101 bits (241), Expect = 1e-21
 Identities = 52/116 (44%), Positives = 70/116 (60%)
 Frame = +3

Query: 249 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPF 428
           ++ A V+VLGDIGRSPRMQYHA SL      V +I Y+ET PL E+  +P   + +L   
Sbjct: 8   KRNACVIVLGDIGRSPRMQYHAQSLLEENYHVDMIGYLETRPLEELTQHPRCRIHELTAV 67

Query: 429 ELKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPVFRLYCMVS 596
            +      L+ + K  WQ++SL+  L   GR  +LL QNPP IP+L V  LYC V+
Sbjct: 68  PVTNLTPKLRLLFKAFWQTLSLLMALISIGRPSFLLVQNPPGIPTLIVCYLYCAVT 123


>AE014297-2416|AAF55475.1|  446|Drosophila melanogaster CG18012-PA
           protein.
          Length = 446

 Score =  101 bits (241), Expect = 1e-21
 Identities = 52/116 (44%), Positives = 70/116 (60%)
 Frame = +3

Query: 249 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPF 428
           ++ A V+VLGDIGRSPRMQYHA SL      V +I Y+ET PL E+  +P   + +L   
Sbjct: 8   KRNACVIVLGDIGRSPRMQYHAQSLLEENYHVDMIGYLETRPLEELTQHPRCRIHELTAV 67

Query: 429 ELKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPVFRLYCMVS 596
            +      L+ + K  WQ++SL+  L   GR  +LL QNPP IP+L V  LYC V+
Sbjct: 68  PVTNLTPKLRLLFKAFWQTLSLLMALISIGRPSFLLVQNPPGIPTLIVCYLYCAVT 123


>BT001681-1|AAN71436.1|  168|Drosophila melanogaster RE56164p
           protein.
          Length = 168

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 20/77 (25%), Positives = 34/77 (44%)
 Frame = +3

Query: 210 SGFKEALMMLGNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVL 389
           SGF+  ++   +++ VA  +VL  I  S   +        + +D   I  V   P PE L
Sbjct: 4   SGFRSIMLRPSSLQAVAIAIVL--ISSSASAEVVNFEPCPDSVDTCTIQQVRVSPCPEAL 61

Query: 390 NNPHITVIKLHPFELKW 440
           NN    + + H  E+ +
Sbjct: 62  NNAACNIRRKHNSEMSF 78


>AY089431-1|AAL90169.1|  358|Drosophila melanogaster AT25123p
           protein.
          Length = 358

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
 Frame = +3

Query: 321 LANNGLDVKIISYV-----ETDPLPEVLNNPHITVIKLHPFELKWGPVVLKYIAKTLWQS 485
           L +  LD K+  YV     E   L E++N  HI    +  FEL    V +  I  T   +
Sbjct: 27  LNSQTLDEKVTMYVYEEIVEGRKLTEIINTTHINSKYMPNFELPPNIVAVDDIVTTARDA 86

Query: 486 VSLMFTL---FLTGRCDYLLGQNPPAIPSLPVFR 578
             ++F +   F++  C  LLG+  P   ++ + +
Sbjct: 87  DIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIK 120


>AE013599-3548|AAF46960.2|  358|Drosophila melanogaster CG3215-PA
           protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
 Frame = +3

Query: 321 LANNGLDVKIISYV-----ETDPLPEVLNNPHITVIKLHPFELKWGPVVLKYIAKTLWQS 485
           L +  LD K+  YV     E   L E++N  HI    +  FEL    V +  I  T   +
Sbjct: 27  LNSQTLDEKVPMYVYEEIVEGRKLTEIINTTHINSKYMPNFELPPNIVAVDDIVTTARDA 86

Query: 486 VSLMFTL---FLTGRCDYLLGQNPPAIPSLPVFR 578
             ++F +   F++  C  LLG+  P   ++ + +
Sbjct: 87  DIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIK 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,606,383
Number of Sequences: 53049
Number of extensions: 576607
Number of successful extensions: 1493
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)