Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18k16
(597 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 3.0
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 3.0
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 6.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 6.9
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.2
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.2
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.2
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.2
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 312 ALSLANNGLDVKIISYVETDPLPE 383
A ++A GLD+K +S+V LP+
Sbjct: 507 ATAVAARGLDIKNVSHVINYDLPK 530
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.6 bits (46), Expect = 3.0
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 312 ALSLANNGLDVKIISYVETDPLP 380
ALSL + L + ++E +P P
Sbjct: 681 ALSLGSEALSAATVRFIEAEPQP 703
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 533 VGPEPARHTILASLS 577
+GPE +RHT L L+
Sbjct: 77 LGPETSRHTTLGLLT 91
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 549 PAIPSLPVFRLYCM 590
P IP LP+ +YC+
Sbjct: 783 PRIPILPMIPVYCV 796
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 284 YVPQYYNFSYFSHI 243
Y P YYN +Y I
Sbjct: 98 YKPLYYNINYIEQI 111
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 284 YVPQYYNFSYFSHI 243
Y P YYN +Y I
Sbjct: 98 YKPLYYNINYIEQI 111
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 284 YVPQYYNFSYFSHI 243
Y P YYN +Y I
Sbjct: 98 YKPLYYNINYIEQI 111
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 284 YVPQYYNFSYFSHI 243
Y P YYN +Y I
Sbjct: 98 YKPLYYNINYIEQI 111
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 284 YVPQYYNFSYFSHI 243
Y P YYN +Y I
Sbjct: 331 YKPLYYNINYIEQI 344
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 284 YVPQYYNFSYFSHI 243
Y P YYN +Y I
Sbjct: 331 YKPLYYNINYIEQI 344
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 284 YVPQYYNFSYFSHI 243
Y P YYN +Y I
Sbjct: 331 YKPLYYNINYIEQI 344
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 284 YVPQYYNFSYFSHI 243
Y P YYN +Y I
Sbjct: 320 YKPLYYNINYIEQI 333
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,485
Number of Sequences: 438
Number of extensions: 4441
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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