Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18j17
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071552-1|AAL49174.1|  146|Drosophila melanogaster RE61805p pro...   131   7e-31
AE014298-1638|AAF48058.1|  146|Drosophila melanogaster CG11699-P...   131   7e-31
X95636-1|CAA64892.1|  431|Drosophila melanogaster S-adenosyl-L-h...    29   7.1  

>AY071552-1|AAL49174.1|  146|Drosophila melanogaster RE61805p
           protein.
          Length = 146

 Score =  131 bits (317), Expect = 7e-31
 Identities = 66/121 (54%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
 Frame = +1

Query: 226 ISAGAFLASVTGISALIGFSATLSTAKKSDPKYFSK-GLHGGAELGDAGAILALRALGWG 402
           I A AFL  V G+SAL GFS TL+TAKK+D K   + G   G  L D GA LALRALGWG
Sbjct: 21  IQAAAFLGLVGGVSALFGFSRTLATAKKTDSKVLQQAGTRQGMILMDEGATLALRALGWG 80

Query: 403 TLYAVAGTGFLCYGIWKLSGARDLKDFRVKMGXXXXXXXXXXXXQSRTEFSGLNDFLTYV 582
           TLYAV GTG  CYG WKLSGA+D ++FR+KMG             SRT+F  L D + Y+
Sbjct: 81  TLYAVMGTGAFCYGFWKLSGAKDFQEFRLKMGNALPRITKDEPPASRTDFESLTDLMKYL 140

Query: 583 S 585
           +
Sbjct: 141 A 141


>AE014298-1638|AAF48058.1|  146|Drosophila melanogaster CG11699-PA
           protein.
          Length = 146

 Score =  131 bits (317), Expect = 7e-31
 Identities = 66/121 (54%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
 Frame = +1

Query: 226 ISAGAFLASVTGISALIGFSATLSTAKKSDPKYFSK-GLHGGAELGDAGAILALRALGWG 402
           I A AFL  V G+SAL GFS TL+TAKK+D K   + G   G  L D GA LALRALGWG
Sbjct: 21  IQAAAFLGLVGGVSALFGFSRTLATAKKTDSKVLQQAGTRQGMILMDEGATLALRALGWG 80

Query: 403 TLYAVAGTGFLCYGIWKLSGARDLKDFRVKMGXXXXXXXXXXXXQSRTEFSGLNDFLTYV 582
           TLYAV GTG  CYG WKLSGA+D ++FR+KMG             SRT+F  L D + Y+
Sbjct: 81  TLYAVMGTGAFCYGFWKLSGAKDFQEFRLKMGNALPRITKDEPPASRTDFESLTDLMKYL 140

Query: 583 S 585
           +
Sbjct: 141 A 141


>X95636-1|CAA64892.1|  431|Drosophila melanogaster
           S-adenosyl-L-homocysteine hydrolaseprotein.
          Length = 431

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = -1

Query: 581 TYVKKSFKPLNSVLD*GGLFFGNVGNKLPIFTLKSFKSLAPES 453
           T V    +PLN +LD GG     V  K P F LK+ K L+ E+
Sbjct: 116 TLVFPDGQPLNMILDDGGDLTNLVHEKFPQF-LKNIKGLSEET 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,283,617
Number of Sequences: 53049
Number of extensions: 538668
Number of successful extensions: 1547
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)