Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18j16
(597 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 27 0.14
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 27 0.14
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 27 0.14
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.24
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.24
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 24 0.98
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 1.7
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 1.7
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 22 4.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 6.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 6.9
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 6.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 6.9
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 6.9
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 9.2
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 9.2
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 27.1 bits (57), Expect = 0.14
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 274 ECNEFL-DGDVDLVPIDCATIHDAQYCIKHVGRFE 375
EC+E D V +P+ C + D CI+ VG+ E
Sbjct: 45 ECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKE 79
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 27.1 bits (57), Expect = 0.14
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 274 ECNEFL-DGDVDLVPIDCATIHDAQYCIKHVGRFE 375
EC+E D V +P+ C + D CI+ VG+ E
Sbjct: 45 ECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKE 79
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 27.1 bits (57), Expect = 0.14
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 274 ECNEFL-DGDVDLVPIDCATIHDAQYCIKHVGRFE 375
EC+E D V +P+ C + D CI+ VG+ E
Sbjct: 45 ECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKE 79
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.2 bits (55), Expect = 0.24
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 157 TEMSRCLTFSILFVLFTTFKT 219
+++S C+ F +LFVLF+ +T
Sbjct: 11 SDVSSCVIFGVLFVLFSFLRT 31
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.2 bits (55), Expect = 0.24
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 157 TEMSRCLTFSILFVLFTTFKT 219
+++S C+ F +LFVLF+ +T
Sbjct: 11 SDVSSCVIFGVLFVLFSFLRT 31
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 24.2 bits (50), Expect = 0.98
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 298 HRLKTHCIRTDYSNQYQNIDNSLYYKL 218
+ ++T+ + T+YS++Y N YKL
Sbjct: 195 NNIETYIVNTNYSSKYMREYNDPEYKL 221
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 268 DYSNQYQNIDNSLYYKL 218
+Y+N Y N + LYY +
Sbjct: 96 NYNNNYNNYNKKLYYNI 112
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.4 bits (48), Expect = 1.7
Identities = 10/43 (23%), Positives = 22/43 (51%)
Frame = +1
Query: 106 LCNDFLFTVINQEKHKNTEMSRCLTFSILFVLFTTFKTVYSIN 234
+C L T + ++HK + + L ++ + F+T+ S+N
Sbjct: 376 VCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLN 418
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +1
Query: 292 DGDVDLVPIDCATIHDAQYCIKHVG 366
+G +++ I ++ D +YCI H+G
Sbjct: 21 NGINEILKIMAVSMKDIRYCIIHMG 45
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 268 DYSNQYQNIDNSLYYKLF 215
+Y+N Y N N+ Y KL+
Sbjct: 100 NYNNNYNNNYNNNYKKLY 117
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 268 DYSNQYQNIDNSLYYKLF 215
+Y+N Y N N+ Y KL+
Sbjct: 100 NYNNNYNNNYNNNYKKLY 117
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.4 bits (43), Expect = 6.9
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 287 F*TVMLTWYPLIVL 328
F +M+ W+PL+V+
Sbjct: 207 FGMIMMYWFPLVVI 220
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 262 SNQYQNIDNSLYYK 221
+N Y N + LYYK
Sbjct: 335 NNNYNNYNKKLYYK 348
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.4 bits (43), Expect = 6.9
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 286 THCIRTDYSNQYQNIDN 236
THC+ + ++ QN +N
Sbjct: 412 THCVNNNQNDNIQNTNN 428
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -3
Query: 259 NQYQNIDNSLYYK 221
N Y N + LYYK
Sbjct: 95 NNYNNYNKKLYYK 107
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -3
Query: 268 DYSNQYQNIDNSLYYK 221
+Y Y N + LYYK
Sbjct: 328 NYKYNYNNYNKKLYYK 343
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 268 DYSNQYQNIDNSLYYKL 218
+Y+N Y N LYY +
Sbjct: 339 NYNNNYNNNYKKLYYNI 355
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 268 DYSNQYQNIDNSLYYKL 218
+Y+N Y N LYY +
Sbjct: 342 NYNNNYNNNCKKLYYNI 358
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 406 KFCCDSCAVKLQTFRRVLCSIEHHEL*HN 320
K C+ VKL+ R +L I+H HN
Sbjct: 201 KMFCNLENVKLKELRIILEDIKHINTRHN 229
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,067
Number of Sequences: 438
Number of extensions: 3696
Number of successful extensions: 32
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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