Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18j07
         (350 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR381696-3|CAI95411.1|  266|Homo sapiens dehydrogenase/reductase...    29   4.1  
CR381696-2|CAI95410.1|  268|Homo sapiens dehydrogenase/reductase...    29   4.1  
BX649443-3|CAI95432.1|  266|Homo sapiens dehydrogenase/reductase...    29   4.1  
BX649443-2|CAI95431.1|  268|Homo sapiens dehydrogenase/reductase...    29   4.1  
BC032340-1|AAH32340.1|  330|Homo sapiens dehydrogenase/reductase...    29   4.1  
BC019696-1|AAH19696.2|  330|Homo sapiens DHRSX protein protein.        29   4.1  
AY358849-1|AAQ89208.1|  330|Homo sapiens ALTE protein.                 29   4.1  
AJ293620-1|CAC82170.1|  330|Homo sapiens putative oxidoreductase...    29   4.1  
AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.            28   7.2  
AL160037-1|CAH72024.1| 1371|Homo sapiens leucine rich repeat con...    28   9.5  
AL024509-3|CAI21665.1| 1371|Homo sapiens leucine rich repeat con...    28   9.5  
AL022170-1|CAI21583.1| 1371|Homo sapiens leucine rich repeat con...    28   9.5  
AK125696-1|BAC86250.1|  499|Homo sapiens protein ( Homo sapiens ...    28   9.5  

>CR381696-3|CAI95411.1|  266|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 266

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
 Frame = +1

Query: 19  KLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFL-----IHALLNNVSVTFTLH 183
           K K+V++  + +E  NDK+  L   + S   + +    F      +H L+NN  V     
Sbjct: 156 KAKQVVSK-IKEETLNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQ 214

Query: 184 RFVDDNVLTQDELSFLANFLVTKL 255
           R   D       L++L +FL+T L
Sbjct: 215 RKTRDGFEEHFGLNYLGHFLLTNL 238


>CR381696-2|CAI95410.1|  268|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
 Frame = +1

Query: 19  KLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFL-----IHALLNNVSVTFTLH 183
           K K+V++  + +E  NDK+  L   + S   + +    F      +H L+NN  V     
Sbjct: 79  KAKQVVSK-IKEETLNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQ 137

Query: 184 RFVDDNVLTQDELSFLANFLVTKL 255
           R   D       L++L +FL+T L
Sbjct: 138 RKTRDGFEEHFGLNYLGHFLLTNL 161


>BX649443-3|CAI95432.1|  266|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 266

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
 Frame = +1

Query: 19  KLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFL-----IHALLNNVSVTFTLH 183
           K K+V++  + +E  NDK+  L   + S   + +    F      +H L+NN  V     
Sbjct: 156 KAKQVVSK-IKEETLNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQ 214

Query: 184 RFVDDNVLTQDELSFLANFLVTKL 255
           R   D       L++L +FL+T L
Sbjct: 215 RKTRDGFEEHFGLNYLGHFLLTNL 238


>BX649443-2|CAI95431.1|  268|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
 Frame = +1

Query: 19  KLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFL-----IHALLNNVSVTFTLH 183
           K K+V++  + +E  NDK+  L   + S   + +    F      +H L+NN  V     
Sbjct: 79  KAKQVVSK-IKEETLNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQ 137

Query: 184 RFVDDNVLTQDELSFLANFLVTKL 255
           R   D       L++L +FL+T L
Sbjct: 138 RKTRDGFEEHFGLNYLGHFLLTNL 161


>BC032340-1|AAH32340.1|  330|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
 Frame = +1

Query: 19  KLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFL-----IHALLNNVSVTFTLH 183
           K K+V++  + +E  NDK+  L   + S   + +    F      +H L+NN  V     
Sbjct: 79  KAKQVVSK-IKEETLNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQ 137

Query: 184 RFVDDNVLTQDELSFLANFLVTKL 255
           R   D       L++L +FL+T L
Sbjct: 138 RKTRDGFEEHFGLNYLGHFLLTNL 161


>BC019696-1|AAH19696.2|  330|Homo sapiens DHRSX protein protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
 Frame = +1

Query: 19  KLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFL-----IHALLNNVSVTFTLH 183
           K K+V++  + +E  NDK+  L   + S   + +    F      +H L+NN  V     
Sbjct: 79  KAKQVVSK-IKEETLNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQ 137

Query: 184 RFVDDNVLTQDELSFLANFLVTKL 255
           R   D       L++L +FL+T L
Sbjct: 138 RKTRDGFEEHFGLNYLGHFLLTNL 161


>AY358849-1|AAQ89208.1|  330|Homo sapiens ALTE protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
 Frame = +1

Query: 19  KLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFL-----IHALLNNVSVTFTLH 183
           K K+V++  + +E  NDK+  L   + S   + +    F      +H L+NN  V     
Sbjct: 79  KAKQVVSK-IKEETLNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQ 137

Query: 184 RFVDDNVLTQDELSFLANFLVTKL 255
           R   D       L++L +FL+T L
Sbjct: 138 RKTRDGFEEHFGLNYLGHFLLTNL 161


>AJ293620-1|CAC82170.1|  330|Homo sapiens putative oxidoreductase
           protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
 Frame = +1

Query: 19  KLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFL-----IHALLNNVSVTFTLH 183
           K K+V++  + +E  NDK+  L   + S   + +    F      +H L+NN  V     
Sbjct: 79  KAKQVVSK-IKEETLNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQ 137

Query: 184 RFVDDNVLTQDELSFLANFLVTKL 255
           R   D       L++L +FL+T L
Sbjct: 138 RKTRDGFEEHFGLNYLGHFLLTNL 161


>AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.
          Length = 6884

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 7    DFSLKLKRVINMFLNDEIENDKIYKLVETV 96
            D S K K ++ + LN E ENDK+YK+++ +
Sbjct: 3111 DDSFKEKEILQIKLNAE-ENDKLYKVLQNM 3139


>AL160037-1|CAH72024.1| 1371|Homo sapiens leucine rich repeat
           containing 16 protein.
          Length = 1371

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 100 SSNKLSRRQVDFLIHALLNNVSVTFTL-HRFVDDNVLTQDELSFLANFL 243
           S   LS + V+ L  +L  N     TL H  +  NVL  D+LS + NFL
Sbjct: 313 SKTSLSPKGVNSLSQSLSANPLTASTLVHLDLSGNVLRGDDLSHMYNFL 361


>AL024509-3|CAI21665.1| 1371|Homo sapiens leucine rich repeat
           containing 16 protein.
          Length = 1371

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 100 SSNKLSRRQVDFLIHALLNNVSVTFTL-HRFVDDNVLTQDELSFLANFL 243
           S   LS + V+ L  +L  N     TL H  +  NVL  D+LS + NFL
Sbjct: 313 SKTSLSPKGVNSLSQSLSANPLTASTLVHLDLSGNVLRGDDLSHMYNFL 361


>AL022170-1|CAI21583.1| 1371|Homo sapiens leucine rich repeat
           containing 16 protein.
          Length = 1371

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 100 SSNKLSRRQVDFLIHALLNNVSVTFTL-HRFVDDNVLTQDELSFLANFL 243
           S   LS + V+ L  +L  N     TL H  +  NVL  D+LS + NFL
Sbjct: 313 SKTSLSPKGVNSLSQSLSANPLTASTLVHLDLSGNVLRGDDLSHMYNFL 361


>AK125696-1|BAC86250.1|  499|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43708 fis, clone TESOP2001953. ).
          Length = 499

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 100 SSNKLSRRQVDFLIHALLNNVSVTFTL-HRFVDDNVLTQDELSFLANFL 243
           S   LS + V+ L  +L  N     TL H  +  NVL  D+LS + NFL
Sbjct: 313 SKTSLSPKGVNSLSQSLSANPLTASTLVHLDLSGNVLRGDDLSHMYNFL 361


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,057,280
Number of Sequences: 237096
Number of extensions: 613930
Number of successful extensions: 898
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)