Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18i23
(622 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 37 0.002
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 34 0.014
SPCC1494.01 ||SPCC965.15|iron/ascorbate oxidoreductase family|Sc... 30 0.31
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 28 1.3
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 3.8
SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||M... 26 3.8
SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 26 3.8
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ... 26 3.8
SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr 3... 26 5.1
SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subun... 26 5.1
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 25 6.7
SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces p... 25 6.7
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 25 6.7
SPCC16A11.14 |sfh1||RSC complex subunit Sfh1 |Schizosaccharomyce... 25 8.8
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 25 8.8
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 37.1 bits (82), Expect = 0.002
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = -2
Query: 564 TTTAVSYWSIASTTLWTAVHPTRTVSFRTFPVKMTPMWNPSSRWSTVFMSSLSTVVVASE 385
T T SYWS+ ST++ V+ T S FP + NP R + +S++ AS+
Sbjct: 96 TVTVSSYWSLVSTSVTGTVYVPYTSSVACFPYATSDAPNPIPRGDSATSTSIAPTYSASD 155
Query: 384 ARRSVGYSSKSFT 346
+ + SS T
Sbjct: 156 SSATTITSSSPST 168
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 34.3 bits (75), Expect = 0.014
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Frame = +2
Query: 164 GIRYDMKRHVAGVISDHQSLILFAIITAQTVNDYVTDLQGLLINIQK*TMDINIASVLEV 343
G+ ++ + +ISD +S + A T DY L+ LL N + +AS ++
Sbjct: 1340 GVENKLRSRYSDLISDVESRGTTVVSIATTTGDYAEKLK-LLRNQDINDFSLGLASYSDI 1398
Query: 344 FVKDLLEYPTDRLASDATTTVLSEDMNTVDHLDEGFHIGVIFTGKVRKDTVRVG---WTA 514
F K L+ P + ++ + D N + D + VI G++ +R+G T
Sbjct: 1399 FDKPLVTLPVKKSSAVDESENDFYDRNDEESFDIVSLVSVIKCGQLLSSKLRLGPLLTTV 1458
Query: 515 VQSVVDAMDQ*DTAVVV 565
++ V++ A+++
Sbjct: 1459 IKLVIEYSQAKHAAIIL 1475
>SPCC1494.01 ||SPCC965.15|iron/ascorbate oxidoreductase
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 321
Score = 29.9 bits (64), Expect = 0.31
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +2
Query: 149 FMVPKGIRYDMKRHVAGVISDHQSLILFAIITAQTVN----DYVTDLQGLLINIQK*TMD 316
+ +P+G+ AG SD+ S+ L A + ++V D+ + +N+Q +
Sbjct: 168 YSIPEGVERREDDEDAGAHSDYGSITLLFQRDAAGLEIRPPNFVKDMDWIKVNVQPDVVL 227
Query: 317 INIASVLEVFVKDLLEYPTDRLASD 391
+NIA +L+ + L R+ D
Sbjct: 228 VNIADMLQFWTSGKLRSTVHRVRID 252
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 27.9 bits (59), Expect = 1.3
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = -2
Query: 432 STVFMSSLSTVVVASEARRSVGY---SSKSFTKTS 337
STV SLSTVV+ +E +S Y S++SF S
Sbjct: 401 STVISKSLSTVVIGNETGKSESYPATSTRSFNDIS 435
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 81 EFNYSAHVVCRFENMKRTGLVVSRS 7
E N +AH++C+FE R L S+S
Sbjct: 1560 ESNTTAHLLCQFEEACRQALTSSKS 1584
>SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1258
Score = 26.2 bits (55), Expect = 3.8
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = -2
Query: 570 GATTTAVSYWSIASTTLWTAVHPTR---TVSFRTFPVKMTPMWNPS-SRWSTVFMSSLST 403
GA T + + + L T +H TV RT + M + RWSTVF ++ S+
Sbjct: 678 GADTVIMERLASDNPYLQTTIHHLEDYATVGLRTLCIAMREVPEDEYQRWSTVFETAASS 737
Query: 402 VV 397
+V
Sbjct: 738 LV 739
>SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 862
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 157 PERHSIRHEASRCWSYFRPPKPDSVCHHHSPDRER 261
P S + S+ +S++RPPKP S D+ R
Sbjct: 690 PVTPSSPYSTSQGYSFYRPPKPKSSVRKRDMDQLR 724
>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
pyridoxine, pyridoxal, and pyridoxamine
Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 26.2 bits (55), Expect = 3.8
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -2
Query: 453 WNPSSRWSTVFMSSLSTVVV--ASEARRSVGYS-SKSFTKTSRTLAILMSM 310
W+ + RWS VFM L + V S S+ YS F +++ + +SM
Sbjct: 75 WHWAKRWSIVFMFCLMQIYVIWTSNGFGSIEYSVMAQFNVSAQVATLCLSM 125
>SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 139 RRGFYGPERHSIRHEASRCWSYFRPPKPDSVCHHHS 246
+ G Y RH + S W YFR + +S+ +H S
Sbjct: 93 KHGKYDFSRHCTDYGHSYEWPYFRSLRRESMLYHTS 128
>SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subunit
Alg2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 511
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 174 YRMPFGTIKATSVKLPKR 121
YR+PF T++A SV+L R
Sbjct: 154 YRIPFDTVEAESVRLADR 171
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 25.4 bits (53), Expect = 6.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 149 KPRLSNSQNGPRTRFLSNGEIPKNSTTP 66
K L + P+ R LSN + P +TTP
Sbjct: 578 KHNLFRKNSFPKRRRLSNSDTPSETTTP 605
>SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 535
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1
Query: 160 RDHKSHVCQTPKTDHALDFSQTEKFQR 80
R +++ +CQT DH L ++EKF++
Sbjct: 352 RKNQAGLCQTVILDHGLYVFESEKFRK 378
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 143 RLSNSQNGPRTRFLSNGEIPKNSTTPR 63
R +S N RT F NG P +S +PR
Sbjct: 78 RSRSSNNKRRTSFGKNGASPTHSASPR 104
>SPCC16A11.14 |sfh1||RSC complex subunit Sfh1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 418
Score = 25.0 bits (52), Expect = 8.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 401 WSSRLKQGGPWDIPANLSQRLREHSQY 321
+SSRLK G I N++ R HS Y
Sbjct: 9 YSSRLKTGNTCLIQKNVAVSTRSHSSY 35
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 25.0 bits (52), Expect = 8.8
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = -2
Query: 594 LRVSWALTGATTTAVSYWSIASTTLWTAVH------PTRTVSFRTFPVKMTPMWNPSSRW 433
LR+S LT ++ T V WS + +H P + + + TP+ +S
Sbjct: 398 LRISLLLTASSDTTVKLWSRGDAGAFECLHVFSFSSPVNCIDWNL--REGTPILAVASNS 455
Query: 432 STVFMSSLSTVVVASEARRSVGYSSKSFTKTSRTLA 325
+++S +A R + S+ SF+ R LA
Sbjct: 456 IVSMYNAISLQQLAVFMRHTAPVSALSFSHNGRYLA 491
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,728,988
Number of Sequences: 5004
Number of extensions: 57356
Number of successful extensions: 173
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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