Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18i18
(695 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF220353-1|AAF32355.1| 2244|Drosophila melanogaster kinesin-like... 32 0.65
AE014134-2053|AAF53088.2| 2013|Drosophila melanogaster CG6392-PA... 32 0.65
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 32 0.86
AY047528-1|AAK77260.1| 191|Drosophila melanogaster GH03388p pro... 31 1.5
AJ133105-1|CAB88005.1| 191|Drosophila melanogaster Hugin protei... 31 1.5
AE014297-1550|AAF54833.1| 191|Drosophila melanogaster CG6371-PA... 31 1.5
AY061430-1|AAL28978.1| 474|Drosophila melanogaster LD35981p pro... 31 2.0
AE014298-2767|AAF48885.2| 474|Drosophila melanogaster CG6961-PA... 31 2.0
AE014298-2765|AAF48882.2| 474|Drosophila melanogaster CG18259-P... 31 2.0
AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-P... 29 4.6
AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-P... 29 4.6
AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-P... 29 4.6
>AF220353-1|AAF32355.1| 2244|Drosophila melanogaster kinesin-like
kinetochore motorprotein CENP-meta protein.
Length = 2244
Score = 32.3 bits (70), Expect = 0.65
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 226 LKAKPQVMDARNKIISKKRIQ--ITDARDKLAELAKQRDARLKLEHLKMQRRGQM 384
++ KPQV + + KR++ I +DKLAE ++ + + K+EHL+ Q + M
Sbjct: 321 IRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEERKNENQQKVEHLERQIKHDM 375
>AE014134-2053|AAF53088.2| 2013|Drosophila melanogaster CG6392-PA
protein.
Length = 2013
Score = 32.3 bits (70), Expect = 0.65
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 226 LKAKPQVMDARNKIISKKRIQ--ITDARDKLAELAKQRDARLKLEHLKMQRRGQM 384
++ KPQV + + KR++ I +DKLAE ++ + + K+EHL+ Q + M
Sbjct: 321 IRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEERKNENQQKVEHLERQIKHDM 375
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 31.9 bits (69), Expect = 0.86
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +1
Query: 304 DKLAE-LAKQRDARLKLEHLKMQRRGQMTPVNVFPKATKFTRTVVNK 441
D+LAE LAK D R + + K+QRRG+ + + V P+A K+ +V+N+
Sbjct: 909 DELAENLAKTYDLRKGVLYRKVQRRGRTSYLPVVPRAFKW--SVINQ 953
>AY047528-1|AAK77260.1| 191|Drosophila melanogaster GH03388p
protein.
Length = 191
Score = 31.1 bits (67), Expect = 1.5
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Frame = +1
Query: 196 HGKQGVQQGPLK-AKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKLEHLKMQR 372
H G +G L A P + +AR K ++TD D+L E + + A ++ M
Sbjct: 38 HISAGSARGSLSPASPALSEARQKRAMGDYKELTDIIDELEENSLAQKASATMQVAAMPP 97
Query: 373 RGQMTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTPNLRRQINNKRRFVGNKAV 552
+GQ ++ P T + ++ K R + + TP L R I++ R A
Sbjct: 98 QGQEFDLDTMPPLTYY--LLLQKLRQLQSNGEP--AYRVRTPRLGRSIDSWRLLDAEGAT 153
Query: 553 G 555
G
Sbjct: 154 G 154
>AJ133105-1|CAB88005.1| 191|Drosophila melanogaster Hugin protein
protein.
Length = 191
Score = 31.1 bits (67), Expect = 1.5
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Frame = +1
Query: 196 HGKQGVQQGPLK-AKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKLEHLKMQR 372
H G +G L A P + +AR K ++TD D+L E + + A ++ M
Sbjct: 38 HISAGSARGSLSPASPALSEARQKRAMGDYKELTDIIDELEENSLAQKASATMQVAAMPP 97
Query: 373 RGQMTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTPNLRRQINNKRRFVGNKAV 552
+GQ ++ P T + ++ K R + + TP L R I++ R A
Sbjct: 98 QGQEFDLDTMPPLTYY--LLLQKLRQLQSNGEP--AYRVRTPRLGRSIDSWRLLDAEGAT 153
Query: 553 G 555
G
Sbjct: 154 G 154
>AE014297-1550|AAF54833.1| 191|Drosophila melanogaster CG6371-PA
protein.
Length = 191
Score = 31.1 bits (67), Expect = 1.5
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Frame = +1
Query: 196 HGKQGVQQGPLK-AKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKLEHLKMQR 372
H G +G L A P + +AR K ++TD D+L E + + A ++ M
Sbjct: 38 HISAGSARGSLSPASPALSEARQKRAMGDYKELTDIIDELEENSLAQKASATMQVAAMPP 97
Query: 373 RGQMTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTPNLRRQINNKRRFVGNKAV 552
+GQ ++ P T + ++ K R + + TP L R I++ R A
Sbjct: 98 QGQEFDLDTMPPLTYY--LLLQKLRQLQSNGEP--AYRVRTPRLGRSIDSWRLLDAEGAT 153
Query: 553 G 555
G
Sbjct: 154 G 154
>AY061430-1|AAL28978.1| 474|Drosophila melanogaster LD35981p
protein.
Length = 474
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 241 QVMDARNKIISKKRIQITDARDKLAELAKQRDARLKLEHLKMQRR 375
+ DARN I +K R +I DARD + + RD+ + L ++R+
Sbjct: 59 RTFDARNTIAAKTRAKIADARDLINK--SVRDSGIDARQLLLERK 101
>AE014298-2767|AAF48885.2| 474|Drosophila melanogaster CG6961-PA
protein.
Length = 474
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 241 QVMDARNKIISKKRIQITDARDKLAELAKQRDARLKLEHLKMQRR 375
+ DARN I +K R +I DARD + + RD+ + L ++R+
Sbjct: 59 RTFDARNTIAAKTRAKIADARDLINK--SVRDSGIDARQLLLERK 101
>AE014298-2765|AAF48882.2| 474|Drosophila melanogaster CG18259-PA
protein.
Length = 474
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 241 QVMDARNKIISKKRIQITDARDKLAELAKQRDARLKLEHLKMQRR 375
+ DARN I +K R +I DARD + + RD+ + L ++R+
Sbjct: 59 RTFDARNTIAAKTRAKIADARDLINK--SVRDSGIDARQLLLERK 101
>AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-PC,
isoform C protein.
Length = 1427
Score = 29.5 bits (63), Expect = 4.6
Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 2/137 (1%)
Frame = +1
Query: 181 KRQNKHGKQGVQQGPLKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKLEHL 360
K N +G G L+A+ QV A + + +A+ + D++ + +
Sbjct: 658 KATNPPAAEGPTPGELRAQEQVAAAAAAAQEAETLSTPPPSPVVAQSLEGSDSKNSVASI 717
Query: 361 KMQ--RRGQMTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTPNLRRQINNKRRF 534
+ RR + + +A + V D++ T VS+P R++ N R
Sbjct: 718 SLDEARRSMENSIALLLQAQNESSKEV--DQLCAQTETIGVSEPATQQERERKLKNARAI 775
Query: 535 VGNKAVGTQKIHKNPQP 585
+GN Q + + P P
Sbjct: 776 IGN---AIQPVIRRPTP 789
>AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-PB,
isoform B protein.
Length = 1427
Score = 29.5 bits (63), Expect = 4.6
Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 2/137 (1%)
Frame = +1
Query: 181 KRQNKHGKQGVQQGPLKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKLEHL 360
K N +G G L+A+ QV A + + +A+ + D++ + +
Sbjct: 658 KATNPPAAEGPTPGELRAQEQVAAAAAAAQEAETLSTPPPSPVVAQSLEGSDSKNSVASI 717
Query: 361 KMQ--RRGQMTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTPNLRRQINNKRRF 534
+ RR + + +A + V D++ T VS+P R++ N R
Sbjct: 718 SLDEARRSMENSIALLLQAQNESSKEV--DQLCAQTETIGVSEPATQQERERKLKNARAI 775
Query: 535 VGNKAVGTQKIHKNPQP 585
+GN Q + + P P
Sbjct: 776 IGN---AIQPVIRRPTP 789
>AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-PA,
isoform A protein.
Length = 1427
Score = 29.5 bits (63), Expect = 4.6
Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 2/137 (1%)
Frame = +1
Query: 181 KRQNKHGKQGVQQGPLKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKLEHL 360
K N +G G L+A+ QV A + + +A+ + D++ + +
Sbjct: 658 KATNPPAAEGPTPGELRAQEQVAAAAAAAQEAETLSTPPPSPVVAQSLEGSDSKNSVASI 717
Query: 361 KMQ--RRGQMTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTPNLRRQINNKRRF 534
+ RR + + +A + V D++ T VS+P R++ N R
Sbjct: 718 SLDEARRSMENSIALLLQAQNESSKEV--DQLCAQTETIGVSEPATQQERERKLKNARAI 775
Query: 535 VGNKAVGTQKIHKNPQP 585
+GN Q + + P P
Sbjct: 776 IGN---AIQPVIRRPTP 789
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,896,543
Number of Sequences: 53049
Number of extensions: 497400
Number of successful extensions: 1447
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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