Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18i08
         (498 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070884-1|AAL48506.1| 1299|Drosophila melanogaster LD29123p pro...    31   0.65 
AE014297-4135|AAF56718.2| 1265|Drosophila melanogaster CG5658-PA...    31   0.65 
AY071275-1|AAL48897.1|  488|Drosophila melanogaster RE30678p pro...    28   6.1  
AE014134-1150|AAF52427.1|  488|Drosophila melanogaster CG11188-P...    28   6.1  

>AY070884-1|AAL48506.1| 1299|Drosophila melanogaster LD29123p
           protein.
          Length = 1299

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 84  SSRSHNIYTVPFCAA*FLRGFPTQTVN 164
           SSRSH I+T+ F  A F+   P++TV+
Sbjct: 216 SSRSHAIFTITFVQAVFMNDMPSETVS 242


>AE014297-4135|AAF56718.2| 1265|Drosophila melanogaster CG5658-PA
           protein.
          Length = 1265

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 84  SSRSHNIYTVPFCAA*FLRGFPTQTVN 164
           SSRSH I+T+ F  A F+   P++TV+
Sbjct: 216 SSRSHAIFTITFVQAVFMNDMPSETVS 242


>AY071275-1|AAL48897.1|  488|Drosophila melanogaster RE30678p
           protein.
          Length = 488

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 304 RFAKKIPKLQSVQSALHQKYEPLK 233
           R +K + +L S+QSALHQ+Y  +K
Sbjct: 270 RSSKLLQQLLSLQSALHQQYSEMK 293


>AE014134-1150|AAF52427.1|  488|Drosophila melanogaster CG11188-PA
           protein.
          Length = 488

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 304 RFAKKIPKLQSVQSALHQKYEPLK 233
           R +K + +L S+QSALHQ+Y  +K
Sbjct: 270 RSSKLLQQLLSLQSALHQQYSEMK 293


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,109,727
Number of Sequences: 53049
Number of extensions: 415831
Number of successful extensions: 994
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)