Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18h21
         (574 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB058728-1|BAB47454.1| 1203|Homo sapiens KIAA1825 protein protein.     64   4e-10
AF288687-1|AAG01173.1| 1086|Homo sapiens CGI-152 protein protein.      37   0.058
U81006-1|AAB38973.1|  663|Homo sapiens p76 protein.                    30   6.7  
BC130293-1|AAI30294.1|  663|Homo sapiens transmembrane 9 superfa...    30   6.7  
BC110656-1|AAI10657.1|  663|Homo sapiens transmembrane 9 superfa...    30   6.7  
AL139035-1|CAH71381.1|  663|Homo sapiens transmembrane 9 superfa...    30   6.7  

>AB058728-1|BAB47454.1| 1203|Homo sapiens KIAA1825 protein protein.
          Length = 1203

 Score = 63.7 bits (148), Expect = 4e-10
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
 Frame = +1

Query: 256 DDLVQYTQLFKPVPTVLQGTVLPFL-FIYPLVFYSWIV-VYGIEDNF----EAGFVTVAV 417
           D+LV     ++ +  + + TVLPF   +YP    +     +G   ++    EA  + +A 
Sbjct: 46  DELVAAVWPYRRLALLRRLTVLPFAGLLYPAWLGAAAAGCWGWGSSWVQIPEAALLVLAT 105

Query: 418 IATVQILICLCCYWSVHINCFLSCSAVKDPIQAEVVKVVPTSNNGSSELVRL 573
           I     L  L  +WSVH +C L+C+   DP +A  VKVVPT NNGS+ELV L
Sbjct: 106 ICLAHALTVLSGHWSVHAHCALTCTPEYDPSKATFVKVVPTPNNGSTELVAL 157


>AF288687-1|AAG01173.1| 1086|Homo sapiens CGI-152 protein protein.
          Length = 1086

 Score = 36.7 bits (81), Expect = 0.058
 Identities = 17/24 (70%), Positives = 19/24 (79%)
 Frame = +1

Query: 502 DPIQAEVVKVVPTSNNGSSELVRL 573
           DP +A  VKVVPT NNGS+ELV L
Sbjct: 17  DPSKATFVKVVPTPNNGSTELVAL 40


>U81006-1|AAB38973.1|  663|Homo sapiens p76 protein.
          Length = 663

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 286 KPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGF---VTVAVIATVQILICLCCY 456
           KP+P ++ G +LPF  I+  +F+    ++  +  +  GF   V + ++ T      L CY
Sbjct: 519 KPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCY 578

Query: 457 W 459
           +
Sbjct: 579 F 579


>BC130293-1|AAI30294.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 286 KPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGF---VTVAVIATVQILICLCCY 456
           KP+P ++ G +LPF  I+  +F+    ++  +  +  GF   V + ++ T      L CY
Sbjct: 519 KPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCY 578

Query: 457 W 459
           +
Sbjct: 579 F 579


>BC110656-1|AAI10657.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 286 KPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGF---VTVAVIATVQILICLCCY 456
           KP+P ++ G +LPF  I+  +F+    ++  +  +  GF   V + ++ T      L CY
Sbjct: 519 KPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCY 578

Query: 457 W 459
           +
Sbjct: 579 F 579


>AL139035-1|CAH71381.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 286 KPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGF---VTVAVIATVQILICLCCY 456
           KP+P ++ G +LPF  I+  +F+    ++  +  +  GF   V + ++ T      L CY
Sbjct: 519 KPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCY 578

Query: 457 W 459
           +
Sbjct: 579 F 579


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,932,631
Number of Sequences: 237096
Number of extensions: 1498415
Number of successful extensions: 3525
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3525
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)