BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18h21
(574 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145632-1|AAD38607.1| 1225|Drosophila melanogaster BcDNA.GH0603... 91 7e-19
AE014134-2033|AAF53072.1| 1225|Drosophila melanogaster CG6230-PA... 91 7e-19
AY069665-1|AAL39810.1| 659|Drosophila melanogaster LD44273p pro... 31 1.1
AE014134-3275|AAF53917.1| 659|Drosophila melanogaster CG9318-PA... 31 1.1
DQ989014-1|ABK97615.1| 454|Drosophila melanogaster gustatory re... 30 1.9
BT025007-1|ABE01237.1| 442|Drosophila melanogaster IP03362p pro... 30 1.9
AE014134-148|AAF51461.2| 447|Drosophila melanogaster CG13948-PA... 30 1.9
BT001866-1|AAN71636.1| 778|Drosophila melanogaster SD01955p pro... 30 2.6
AE014297-6|AAF52171.2| 778|Drosophila melanogaster CG12582-PB, ... 30 2.6
AE014297-5|AAF52172.2| 908|Drosophila melanogaster CG12582-PA, ... 30 2.6
AE014297-2602|AAN13795.1| 412|Drosophila melanogaster CG31222-P... 29 5.9
>AF145632-1|AAD38607.1| 1225|Drosophila melanogaster BcDNA.GH06032
protein.
Length = 1225
Score = 91.5 bits (217), Expect = 7e-19
Identities = 56/141 (39%), Positives = 73/141 (51%), Gaps = 22/141 (15%)
Frame = +1
Query: 211 EFFIATSMVKMQSSLDDLVQYTQLFKPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNF 390
E + + K + LDDLVQY L +PT L G VLPF+ +Y FY WI V G ++N
Sbjct: 23 EMALQSGRPKEPTKLDDLVQYVSLHVRIPTPLTGVVLPFVPLYLSAFYLWINVTGGQEND 82
Query: 391 ----------------------EAGFVTVAVIATVQILICLCCYWSVHINCFLSCSAVKD 504
+ GF+ V IA + IL L CYWSVH+ FL+C VK
Sbjct: 83 TTNNDVITADNQTTTDNITTWNDVGFIGVLAIAFLHILTLLFCYWSVHVLAFLTCRRVKL 142
Query: 505 PIQAEVVKVVPTSNNGSSELV 567
P + KVVPT NNG+S++V
Sbjct: 143 PGANVLAKVVPTPNNGNSKIV 163
>AE014134-2033|AAF53072.1| 1225|Drosophila melanogaster CG6230-PA
protein.
Length = 1225
Score = 91.5 bits (217), Expect = 7e-19
Identities = 56/141 (39%), Positives = 73/141 (51%), Gaps = 22/141 (15%)
Frame = +1
Query: 211 EFFIATSMVKMQSSLDDLVQYTQLFKPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNF 390
E + + K + LDDLVQY L +PT L G VLPF+ +Y FY WI V G ++N
Sbjct: 23 EMALQSGRPKEPTKLDDLVQYVSLHVRIPTPLTGVVLPFVPLYLSAFYLWINVTGGQEND 82
Query: 391 ----------------------EAGFVTVAVIATVQILICLCCYWSVHINCFLSCSAVKD 504
+ GF+ V IA + IL L CYWSVH+ FL+C VK
Sbjct: 83 TTNNDVITADNQTTTDNITTWNDVGFIGVLAIAFLHILTLLFCYWSVHVLAFLTCRRVKL 142
Query: 505 PIQAEVVKVVPTSNNGSSELV 567
P + KVVPT NNG+S++V
Sbjct: 143 PGANVLAKVVPTPNNGNSKIV 163
>AY069665-1|AAL39810.1| 659|Drosophila melanogaster LD44273p
protein.
Length = 659
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +1
Query: 208 IEFFIATSMVKMQSSLDDLVQYTQLFKPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDN 387
+E + T+ + Q + D YTQ P+P ++ G VLPF I+ +F+ ++ +
Sbjct: 494 LEHPVRTNQIPRQ--IPDQSIYTQ---PIPGIVMGGVLPFGCIFIQLFFILSSLWSSQIY 548
Query: 388 FEAGF---VTVAVIATVQILICLCCYW 459
+ GF V V ++ T L CY+
Sbjct: 549 YMFGFLFLVFVILVITCSETTILLCYF 575
>AE014134-3275|AAF53917.1| 659|Drosophila melanogaster CG9318-PA
protein.
Length = 659
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +1
Query: 208 IEFFIATSMVKMQSSLDDLVQYTQLFKPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDN 387
+E + T+ + Q + D YTQ P+P ++ G VLPF I+ +F+ ++ +
Sbjct: 494 LEHPVRTNQIPRQ--IPDQSIYTQ---PIPGIVMGGVLPFGCIFIQLFFILSSLWSSQIY 548
Query: 388 FEAGF---VTVAVIATVQILICLCCYW 459
+ GF V V ++ T L CY+
Sbjct: 549 YMFGFLFLVFVILVITCSETTILLCYF 575
>DQ989014-1|ABK97615.1| 454|Drosophila melanogaster gustatory
receptor 21a protein.
Length = 454
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Frame = +1
Query: 310 GTVLPFLFIYPLVF----YSWIVV-------YGIEDNFEAGFVTVAVIATVQILICLCCY 456
G+ + F +YPL + +SW++ Y ++ +F + T A + +L C C
Sbjct: 199 GSPIVFPNLYPLTWSLCVFSWLLSIAINLSQYFLQPDFRLWY-TFAYYPIIAMLNCFCSL 257
Query: 457 WSVHINCFLSCS-AVKDPIQAEV 522
W ++ N F + S A+ D +Q +
Sbjct: 258 WYINCNAFGTASRALSDALQTTI 280
>BT025007-1|ABE01237.1| 442|Drosophila melanogaster IP03362p
protein.
Length = 442
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Frame = +1
Query: 310 GTVLPFLFIYPLVF----YSWIVV-------YGIEDNFEAGFVTVAVIATVQILICLCCY 456
G+ + F +YPL + +SW++ Y ++ +F + T A + +L C C
Sbjct: 239 GSPIVFPNLYPLTWSLCVFSWLLSIAINLSQYFLQPDFRLWY-TFAYYPIIAMLNCFCSL 297
Query: 457 WSVHINCFLSCS-AVKDPIQAEV 522
W ++ N F + S A+ D +Q +
Sbjct: 298 WYINCNAFGTASRALSDALQTTI 320
>AE014134-148|AAF51461.2| 447|Drosophila melanogaster CG13948-PA
protein.
Length = 447
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Frame = +1
Query: 310 GTVLPFLFIYPLVF----YSWIVV-------YGIEDNFEAGFVTVAVIATVQILICLCCY 456
G+ + F +YPL + +SW++ Y ++ +F + T A + +L C C
Sbjct: 192 GSPIVFPNLYPLTWSLCVFSWLLSIAINLSQYFLQPDFRLWY-TFAYYPIIAMLNCFCSL 250
Query: 457 WSVHINCFLSCS-AVKDPIQAEV 522
W ++ N F + S A+ D +Q +
Sbjct: 251 WYINCNAFGTASRALSDALQTTI 273
>BT001866-1|AAN71636.1| 778|Drosophila melanogaster SD01955p
protein.
Length = 778
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 373 GIEDNFEAGFVTVAVIATVQILICLC--CYWSVHINCFL 483
GI N E VAVI V + + YW++HI CFL
Sbjct: 81 GIWKNVELEIYEVAVIREVDVDVSRVNGSYWNMHIRCFL 119
>AE014297-6|AAF52171.2| 778|Drosophila melanogaster CG12582-PB,
isoform B protein.
Length = 778
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 373 GIEDNFEAGFVTVAVIATVQILICLC--CYWSVHINCFL 483
GI N E VAVI V + + YW++HI CFL
Sbjct: 81 GIWKNVELEIYEVAVIREVDVDVSRVNGSYWNMHIRCFL 119
>AE014297-5|AAF52172.2| 908|Drosophila melanogaster CG12582-PA,
isoform A protein.
Length = 908
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 373 GIEDNFEAGFVTVAVIATVQILICLC--CYWSVHINCFL 483
GI N E VAVI V + + YW++HI CFL
Sbjct: 211 GIWKNVELEIYEVAVIREVDVDVSRVNGSYWNMHIRCFL 249
>AE014297-2602|AAN13795.1| 412|Drosophila melanogaster CG31222-PA
protein.
Length = 412
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 2 LSGFTLRSFSMHFTHYFCNLQHVNNLSSWLDSEIKPLF*IKTNQLNGAMLRDSI 163
L + L +F H C L V L LD +K +TN+++G++ R +
Sbjct: 280 LMAWHLETFGFHLKSATCQLSRVAALVLALDGRLKRSSATRTNRIDGSLSRSQM 333
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,040,810
Number of Sequences: 53049
Number of extensions: 458462
Number of successful extensions: 967
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -