Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18h21
(574 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr... 73 1e-13
AL021479-1|CAA16321.2| 346|Caenorhabditis elegans Hypothetical ... 35 0.036
Z82057-5|CAB04861.3| 325|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z81142-11|CAB03512.3| 325|Caenorhabditis elegans Hypothetical p... 31 0.58
Z75550-2|CAA99928.2| 421|Caenorhabditis elegans Hypothetical pr... 30 1.0
AF040649-2|AAB95004.2| 324|Caenorhabditis elegans Serpentine re... 29 1.8
AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily a... 29 1.8
AF024494-9|AAB70333.1| 336|Caenorhabditis elegans Serpentine re... 29 3.1
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 28 5.4
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 28 5.4
Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81132-11|CAB03426.2| 302|Caenorhabditis elegans Hypothetical p... 27 7.2
Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z74026-4|CAA98416.5| 774|Caenorhabditis elegans Hypothetical pr... 27 9.5
U46753-9|AAA85765.1| 226|Caenorhabditis elegans Hypothetical pr... 27 9.5
U28412-2|AAL56625.1| 501|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical
protein C10C6.6 protein.
Length = 1178
Score = 72.9 bits (171), Expect = 1e-13
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1
Query: 316 VLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIATVQILICLCCYWSVHINCFLSCSA 495
V PF I + Y W+ ++G E+ +E G + A I + L+ L C+W + + CFL CS
Sbjct: 24 VPPFTIITAIWTYVWLNIFGYEEYYELGMLGYAAIFVILALVLLFCHWMMPVRCFLMCSK 83
Query: 496 VKDPIQAEVVKVVPTSNNGSSELVRL 573
+D A V V+PT NNG ELV+L
Sbjct: 84 QEDVRIASHVCVIPTQNNGWPELVKL 109
>AL021479-1|CAA16321.2| 346|Caenorhabditis elegans Hypothetical
protein Y22F5A.2 protein.
Length = 346
Score = 35.1 bits (77), Expect = 0.036
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Frame = +1
Query: 292 VPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIA--TVQILICLCCYWSV 465
+ T++Q V F F++P++ S +++ G +D A V + VI+ + + +C ++
Sbjct: 246 ISTIMQNLVFAFFFLFPILILSVVILTG-KDASGACLVLIGVISFHSSANTLVMCLTFTS 304
Query: 466 HINCFLS--CSAVKDPIQAEVVKVVPTSNNGSSELVRL 573
LS C+ + Q+ + +VP NN S ++R+
Sbjct: 305 FRKAILSFFCNFCQQN-QSRTITIVPPVNNLSVTVIRV 341
>Z82057-5|CAB04861.3| 325|Caenorhabditis elegans Hypothetical
protein ZK1037.11 protein.
Length = 325
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 307 QGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIATVQILICL 447
+ TV + F++ L+F W+ + D+ G VT+ ++ V I+I +
Sbjct: 72 KATVKSYTFLFILIF--WLALATFSDSVNFGIVTIIILTVVVIIIAI 116
>Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical
protein T23D5.12 protein.
Length = 350
Score = 31.1 bits (67), Expect = 0.58
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Frame = +1
Query: 82 KLARLRNQTIILN*NQ-SIEWSNAA**YHLVKIWQLR*NPYQLIEFFIATSMVKMQSSLD 258
KL+ + + T ++ + +I W N A + I L+ Y +I F V M+ +
Sbjct: 177 KLSAIPSFTFVIYTERGAIRWRNLACTIEMTMIIGLQ---YSIICFCGRKMSVGMKEKIS 233
Query: 259 DLVQ-----YTQLFKPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAG--FVTVAV 417
L + +TQ FK + +LQ V L +P++ ++ V+ ++ +F G F A+
Sbjct: 234 MLSETSKRLHTQFFKAL--ILQIVVPTILLFFPMIIIIYLPVFNLKFSFPTGILFSAFAI 291
Query: 418 IATVQILICL 447
++ I I L
Sbjct: 292 YPSIDIAIIL 301
>Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical
protein T23D5.10 protein.
Length = 364
Score = 31.1 bits (67), Expect = 0.58
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Frame = +1
Query: 82 KLARLRNQTIILN*NQ-SIEWSNAA**YHLVKIWQLR*NPYQLIEFFIATSMVKMQSSLD 258
KL+ + + T ++ + +I W N A + I L+ Y +I F V M+ +
Sbjct: 191 KLSAIPSFTFVIYTERGAIRWRNLACTIEMTMIIGLQ---YSIICFCGRKMSVGMKEKIS 247
Query: 259 DLVQ-----YTQLFKPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAG--FVTVAV 417
L + +TQ FK + +LQ V L +P++ ++ V+ ++ +F G F A+
Sbjct: 248 MLSETSKRLHTQFFKAL--ILQIVVPTILLFFPMIIIIYLPVFNLKFSFPTGILFSAFAI 305
Query: 418 IATVQILICL 447
++ I I L
Sbjct: 306 YPSIDIAIIL 315
>Z81142-11|CAB03512.3| 325|Caenorhabditis elegans Hypothetical
protein ZK1037.11 protein.
Length = 325
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 307 QGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIATVQILICL 447
+ TV + F++ L+F W+ + D+ G VT+ ++ V I+I +
Sbjct: 72 KATVKSYTFLFILIF--WLALATFSDSVNFGIVTIIILTVVVIIIAI 116
>Z75550-2|CAA99928.2| 421|Caenorhabditis elegans Hypothetical
protein T22C1.3 protein.
Length = 421
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +1
Query: 301 VLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIATVQILICLCCYWS 462
++ GT++ +F+ P++++ WIV NF G V +A + +++ + +S
Sbjct: 345 LIAGTIVSTVFLMPVMWHMWIVSSSGNANFFFGTTIVYNVALINLVMDMIFVYS 398
>AF040649-2|AAB95004.2| 324|Caenorhabditis elegans Serpentine
receptor, class i protein74 protein.
Length = 324
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 202 QLIEFFIATSMVKMQSSLDDLVQYTQLFKPVPTVLQGTVLPFL--FIYPLVFYSWIVVYG 375
QL +F + ++ L D + +T L +P+P + P IY +VF +W +G
Sbjct: 40 QLGKFKYYLLLFQLSCVLTD-IDFTILVQPIP------LFPLFAGHIYGVVF-TW---FG 88
Query: 376 IEDNFEAGFVTVAVIATVQILICLCCYWSVH 468
+ N G VT+A +A +QI L C+ H
Sbjct: 89 LPAN--TGAVTIAFVAAIQIESLLVCFMEKH 117
>AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily
assigned gene nameprotein 123 protein.
Length = 655
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +1
Query: 286 KPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIATVQILICLCCYWSV 465
KP+P +L G +LPF I+ +F+ ++ + + GF+ + + ILI C ++
Sbjct: 511 KPLPGMLMGGILPFGCIFIQLFFILNSIWAHQTYYMFGFLFLVYL----ILIITCSEATI 566
Query: 466 HINCFLSCS 492
+ F C+
Sbjct: 567 LLAYFHLCA 575
>AF024494-9|AAB70333.1| 336|Caenorhabditis elegans Serpentine
receptor, class u protein27 protein.
Length = 336
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 262 LVQYTQLFKPVPTVLQGTVLPFLFIYPL--VFYSWIVV 369
L+ Y Q + + V+ + LPF+ IYP+ F+ W V
Sbjct: 140 LIAYPQRQEKINRVILKSALPFILIYPMFFTFFMWPAV 177
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 27.9 bits (59), Expect = 5.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 430 QILICLCCYWSVHINCFLSC 489
++ IC+CC WS +L C
Sbjct: 66 KLFICVCCNWSFGTEIYLKC 85
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 27.9 bits (59), Expect = 5.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 430 QILICLCCYWSVHINCFLSC 489
++ IC+CC WS +L C
Sbjct: 66 KLFICVCCNWSFGTEIYLKC 85
>Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical
protein M01B2.7 protein.
Length = 302
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 319 LPFLFIYPLVFYSWIVVYGIEDNFEAGFVTV---AVIATVQILICLCCY 456
+ L + L YS I + G N VT+ + + ILIC+CC+
Sbjct: 1 MELLLVILLFLYSTIFIVGFTGNLLMVLVTLHSNKLRSICNILICVCCF 49
>Z81132-11|CAB03426.2| 302|Caenorhabditis elegans Hypothetical
protein T26E4.15 protein.
Length = 302
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 319 LPFLFIYPLVFYSWIVVYGIEDNFEAGFVTV---AVIATVQILICLCCY 456
+ L + L YS I + G N VT+ + + ILIC+CC+
Sbjct: 1 MELLLVILLFLYSTIFIVGFTGNLFMVLVTLHSNKLRSICNILICVCCF 49
>Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical
protein T10G3.2 protein.
Length = 346
Score = 27.5 bits (58), Expect = 7.2
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 337 YPLVFYSWIVVYGIEDNFEAGFVTVAVIAT--VQILICLCCYWSVHINCFLSCSAVK 501
Y LVF + I+VY IE F V +A I T +Q+L + C WS+ + F++ S K
Sbjct: 143 YALVF-ACILVY-IE--FANRHVMMATIPTRNIQVLFAIICSWSLILLLFINRSKSK 195
>Z74026-4|CAA98416.5| 774|Caenorhabditis elegans Hypothetical
protein B0240.2 protein.
Length = 774
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 223 ATSMVKMQSSLDDLVQ-YTQLFKPVPTVLQGTVLPFLFIYPLVF-YSWIVVYGIEDNFEA 396
A ++ SL +V Y ++ + +L+ ++P L I+P ++ ++ Y D+F+
Sbjct: 389 ANLRASIKKSLMGIVNVYIRIINIISFILRYCIMPGLLIWPFIYTLRFMYNYNYNDDFKN 448
Query: 397 GFVT 408
F+T
Sbjct: 449 RFLT 452
>U46753-9|AAA85765.1| 226|Caenorhabditis elegans Hypothetical
protein C34F11.1 protein.
Length = 226
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -3
Query: 563 SSDDPLLEVGTTLTT-SACIGSLTAEQERKQLI*TLQ*QHKHMRIWTVAITATVTNPASK 387
S++ P+ + T +T +A + +L + + Q H+RIW V+ +AT T+ A++
Sbjct: 67 STEQPVAQATTHPSTENARVPALVLRSGSWRALPVAQGGSSHIRIWPVSRSATTTSTATR 126
>U28412-2|AAL56625.1| 501|Caenorhabditis elegans Hypothetical
protein T19C3.1 protein.
Length = 501
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 208 IEFFIATSMVKMQSSLDDLVQYTQLFKPVPTVLQGTVLPFLFI 336
+ + A +V Q + D+ TQ+ PVP + TVL F+F+
Sbjct: 267 VRVYFAICLVSRQFLISDMKSKTQMDWPVPIM---TVLEFIFV 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,603,819
Number of Sequences: 27780
Number of extensions: 248118
Number of successful extensions: 728
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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