Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18g18
         (555 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011121-1|AAR82788.1|  408|Drosophila melanogaster LD13390p pro...   163   1e-40
AF333187-1|AAK60520.1|  386|Drosophila melanogaster beta-alanine...   163   1e-40
AE014297-636|AAF54141.2|  386|Drosophila melanogaster CG3027-PA ...   163   1e-40
AE014296-1812|AAF50160.2|  343|Drosophila melanogaster CG6559-PA...    29   4.2  
AE014296-2257|AAF49833.1| 1544|Drosophila melanogaster CG17687-P...    28   9.7  

>BT011121-1|AAR82788.1|  408|Drosophila melanogaster LD13390p
           protein.
          Length = 408

 Score =  163 bits (396), Expect = 1e-40
 Identities = 80/166 (48%), Positives = 105/166 (63%)
 Frame = +1

Query: 58  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 237
           E  +L   +  +L   +L+E  RI +G   +  ++L  S+               F A++
Sbjct: 27  ELKNLNDCLEKHLPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQNGFDIKGYRFTARE 86

Query: 238 EQTRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNM 417
           EQTR  RIV+VG IQ+SI +PT  P+ +Q++AI+NKVK +I  A + G NI+C QE W M
Sbjct: 87  EQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTM 146

Query: 418 PFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILER 555
           PFAFCTREK PWCEFAE AE+GPTT  L ELA  Y MVI+ SILER
Sbjct: 147 PFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILER 192


>AF333187-1|AAK60520.1|  386|Drosophila melanogaster beta-alanine
           synthase protein.
          Length = 386

 Score =  163 bits (396), Expect = 1e-40
 Identities = 80/166 (48%), Positives = 105/166 (63%)
 Frame = +1

Query: 58  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 237
           E  +L   +  +L   +L+E  RI +G   +  ++L  S+               F A++
Sbjct: 5   ELKNLNDCLEKHLPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQNGFDIKGYRFTARE 64

Query: 238 EQTRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNM 417
           EQTR  RIV+VG IQ+SI +PT  P+ +Q++AI+NKVK +I  A + G NI+C QE W M
Sbjct: 65  EQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTM 124

Query: 418 PFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILER 555
           PFAFCTREK PWCEFAE AE+GPTT  L ELA  Y MVI+ SILER
Sbjct: 125 PFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILER 170


>AE014297-636|AAF54141.2|  386|Drosophila melanogaster CG3027-PA
           protein.
          Length = 386

 Score =  163 bits (396), Expect = 1e-40
 Identities = 80/166 (48%), Positives = 105/166 (63%)
 Frame = +1

Query: 58  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 237
           E  +L   +  +L   +L+E  RI +G   +  ++L  S+               F A++
Sbjct: 5   ELKNLNDCLEKHLPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQNGFDIKGYRFTARE 64

Query: 238 EQTRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNM 417
           EQTR  RIV+VG IQ+SI +PT  P+ +Q++AI+NKVK +I  A + G NI+C QE W M
Sbjct: 65  EQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTM 124

Query: 418 PFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILER 555
           PFAFCTREK PWCEFAE AE+GPTT  L ELA  Y MVI+ SILER
Sbjct: 125 PFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILER 170


>AE014296-1812|AAF50160.2|  343|Drosophila melanogaster CG6559-PA
           protein.
          Length = 343

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 421 FAFCTREKQPWCEFAESAEDGPTTTF 498
           F+FCT+EK+P   + E+ + G  +TF
Sbjct: 86  FSFCTQEKKPGKNWVENPKGGGPSTF 111


>AE014296-2257|AAF49833.1| 1544|Drosophila melanogaster CG17687-PA
            protein.
          Length = 1544

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/58 (22%), Positives = 27/58 (46%)
 Frame = +1

Query: 238  EQTRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELW 411
            +Q +PP +    + +  +        + + KAI  +  K ID  G++G  ++  +E W
Sbjct: 931  DQFKPPELTVPSLAKDEVIKQIMEVDDSEVKAINRRKPKTIDTGGKKGRLLLWSKEFW 988


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,195,710
Number of Sequences: 53049
Number of extensions: 476157
Number of successful extensions: 1712
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)