Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18g18
         (555 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   130   9e-31
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z93379-2|CAB07592.1|  170|Caenorhabditis elegans Hypothetical pr...    27   6.9  
AF022981-4|AAG24205.1|  602|Caenorhabditis elegans Hypothetical ...    27   6.9  
Z81074-8|CAB03043.1|  413|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U39993-4|AAA81088.1|  135|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  130 bits (313), Expect = 9e-31
 Identities = 73/164 (44%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
 Frame = +1

Query: 70  LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQ 243
           +E+ +   L G  L+E  RI +GR       L+ SSI              +   A+ EQ
Sbjct: 11  VETALAEKLDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQ 67

Query: 244 TRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPF 423
           TR PR+V+V  IQ+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPF
Sbjct: 68  TRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPF 127

Query: 424 AFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILER 555
           AFCTRE+ PW EFAES   GPTT FL +LA+K+ +VI+S ILER
Sbjct: 128 AFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILER 171


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 328 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 462
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 328 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 462
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -2

Query: 506 SRRKVVVGPSSADSANSHHGCFSLVQNAKGIFHNSWKQMMLTPSWPATS 360
           SR K+    +S+   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


>Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical
           protein K02A11.1b protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +1

Query: 355 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 510
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


>Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical
           protein K02A11.1a protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +1

Query: 355 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 510
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


>Z93379-2|CAB07592.1|  170|Caenorhabditis elegans Hypothetical
           protein F21H7.3 protein.
          Length = 170

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 328 KAIFNKVKKIIDVAGQEGVNIICFQELW 411
           K +FNKVKK+++   Q+G     F+  W
Sbjct: 58  KILFNKVKKLMEDVPQDGRKKNWFENFW 85


>AF022981-4|AAG24205.1|  602|Caenorhabditis elegans Hypothetical
           protein W03F9.10 protein.
          Length = 602

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 22/89 (24%), Positives = 35/89 (39%)
 Frame = +1

Query: 85  NNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKDEQTRPPRIV 264
           N NL+ ++L+E  R     +     K KES                 P K+E+      V
Sbjct: 14  NKNLSKKELQELKR-----KQQKSKKKKESKKRAKATKQAEIETREEPKKEEENGDDLDV 68

Query: 265 KVGIIQHSIAVPTDRPVNEQKKAIFNKVK 351
           ++  I  +I +  D P  +   AIF+  K
Sbjct: 69  EIDYIGETIEIEPDNPHAQYFSAIFDAFK 97


>Z81074-8|CAB03043.1|  413|Caenorhabditis elegans Hypothetical
           protein F32B6.9 protein.
          Length = 413

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 485 GPSSADSANSHHGCFSLVQNAKGIFHNSW 399
           G  S     SHHGC SL ++ K   H SW
Sbjct: 388 GKGSIKDLESHHGCVSLKKDKK---HISW 413


>U39993-4|AAA81088.1|  135|Caenorhabditis elegans Hypothetical
           protein F47E1.1 protein.
          Length = 135

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/47 (23%), Positives = 23/47 (48%)
 Frame = +1

Query: 301 TDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTRE 441
           ++RP+ E K    N    +  + G+  +  +C++ L N P ++   E
Sbjct: 79  SERPLEEDKTPSINGQCYLRPIGGKPFMECVCYRNLCNQPTSYADFE 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,216,805
Number of Sequences: 27780
Number of extensions: 238065
Number of successful extensions: 761
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)