Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18g08
         (600 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035896-1|AAH35896.1|  820|Homo sapiens KIF26B protein protein.       30   7.1  
AY923834-1|AAY17361.1| 2108|Homo sapiens kinesin family member 2...    30   7.1  
AK128806-1|BAC87614.1|  686|Homo sapiens protein ( Homo sapiens ...    30   7.1  

>BC035896-1|AAH35896.1|  820|Homo sapiens KIF26B protein protein.
          Length = 820

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 369 SGISRRCPVPYCDHATIPSRTPLPPATERASVVRRK 476
           S  S+RC V Y     +PS  PLPP+++ + V  R+
Sbjct: 700 SSPSQRCKV-YTQKGVLPSPAPLPPSSKDSGVASRE 734


>AY923834-1|AAY17361.1| 2108|Homo sapiens kinesin family member 26B
            protein.
          Length = 2108

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 369  SGISRRCPVPYCDHATIPSRTPLPPATERASVVRRK 476
            S  S+RC V Y     +PS  PLPP+++ + V  R+
Sbjct: 1083 SSPSQRCKV-YTQKGVLPSPAPLPPSSKDSGVASRE 1117


>AK128806-1|BAC87614.1|  686|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45912 fis, clone PEBLM2006298. ).
          Length = 686

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 369 SGISRRCPVPYCDHATIPSRTPLPPATERASVVRRK 476
           S  S+RC V Y     +PS  PLPP+++ + V  R+
Sbjct: 325 SSPSQRCKV-YTQKGVLPSPAPLPPSSKDSGVASRE 359


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,367,592
Number of Sequences: 237096
Number of extensions: 1945392
Number of successful extensions: 4096
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4095
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)