Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18g08
         (600 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023820-1|AAZ86741.1|  340|Drosophila melanogaster RH64870p pro...    31   1.6  
AE014298-2615|AAF48769.1|  340|Drosophila melanogaster CG6492-PA...    31   1.6  
BT025851-1|ABF85751.1|  571|Drosophila melanogaster IP14996p pro...    29   4.8  
AE014298-1097|AAS65276.1|  557|Drosophila melanogaster CG15332-P...    29   4.8  
AE014298-1096|AAF46303.1|  571|Drosophila melanogaster CG15332-P...    29   4.8  

>BT023820-1|AAZ86741.1|  340|Drosophila melanogaster RH64870p
           protein.
          Length = 340

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 479 KFSSDNTSALSSWRQRRAGGDSGVIAVWHGTPAGYTRI 366
           +F+ + T AL  W+    G  +G +A W  +PA   ++
Sbjct: 133 EFTQNGTQALPVWKSALCGVTAGAVAQWLASPADLVKV 170


>AE014298-2615|AAF48769.1|  340|Drosophila melanogaster CG6492-PA
           protein.
          Length = 340

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 479 KFSSDNTSALSSWRQRRAGGDSGVIAVWHGTPAGYTRI 366
           +F+ + T AL  W+    G  +G +A W  +PA   ++
Sbjct: 133 EFTQNGTQALPVWKSALCGVTAGAVAQWLASPADLVKV 170


>BT025851-1|ABF85751.1|  571|Drosophila melanogaster IP14996p
           protein.
          Length = 571

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 21/106 (19%), Positives = 38/106 (35%)
 Frame = -2

Query: 422 GDSGVIAVWHGTPAGYTRICLRELIWSXXXXXXXXXXX*KTKRCSASGPPPECTKVEKSC 243
           G+   +   H T   Y      EL+               T R  +  P P C + + + 
Sbjct: 171 GEDAFVYEMHATDHHYDDDITEELMLRPDFTLSVAYSLPATMRLPSPYPYP-CVQAQDNI 229

Query: 242 MICTLKKFIIMMKHFINMSGTIFQTI*KSLFSGKIFTFKLFNQKCP 105
               L K +++M H +N++ +I  T+         F      ++CP
Sbjct: 230 YTPDLSKVLMLMPHQLNITVSILSTVNNPHVPSVAFATMCDEEECP 275


>AE014298-1097|AAS65276.1|  557|Drosophila melanogaster CG15332-PB,
           isoform B protein.
          Length = 557

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 21/106 (19%), Positives = 38/106 (35%)
 Frame = -2

Query: 422 GDSGVIAVWHGTPAGYTRICLRELIWSXXXXXXXXXXX*KTKRCSASGPPPECTKVEKSC 243
           G+   +   H T   Y      EL+               T R  +  P P C + + + 
Sbjct: 157 GEDAFVYEMHATDHHYDDDITEELMLRPDFTLSVAYSLPATMRLPSPYPYP-CVQAQDNI 215

Query: 242 MICTLKKFIIMMKHFINMSGTIFQTI*KSLFSGKIFTFKLFNQKCP 105
               L K +++M H +N++ +I  T+         F      ++CP
Sbjct: 216 YTPDLSKVLMLMPHQLNITVSILSTVNNPHVPSVAFATMCDEEECP 261


>AE014298-1096|AAF46303.1|  571|Drosophila melanogaster CG15332-PA,
           isoform A protein.
          Length = 571

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 21/106 (19%), Positives = 38/106 (35%)
 Frame = -2

Query: 422 GDSGVIAVWHGTPAGYTRICLRELIWSXXXXXXXXXXX*KTKRCSASGPPPECTKVEKSC 243
           G+   +   H T   Y      EL+               T R  +  P P C + + + 
Sbjct: 171 GEDAFVYEMHATDHHYDDDITEELMLRPDFTLSVAYSLPATMRLPSPYPYP-CVQAQDNI 229

Query: 242 MICTLKKFIIMMKHFINMSGTIFQTI*KSLFSGKIFTFKLFNQKCP 105
               L K +++M H +N++ +I  T+         F      ++CP
Sbjct: 230 YTPDLSKVLMLMPHQLNITVSILSTVNNPHVPSVAFATMCDEEECP 275


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,337,930
Number of Sequences: 53049
Number of extensions: 555546
Number of successful extensions: 1476
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)