Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18g06
(611 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0961 + 12759701-12760054,12760294-12760420,12760719-127611... 48 6e-06
03_05_0868 + 28385066-28385478,28386050-28386167,28386365-283867... 33 0.13
10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,558... 31 0.54
05_01_0025 - 171012-171263,171361-171450,171536-171592,171907-17... 30 1.7
01_01_0085 - 639959-640192,640290-640379,640465-640521,640826-64... 30 1.7
10_08_0309 + 16666047-16666543,16666626-16666836,16666925-166670... 29 2.2
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 29 3.8
03_04_0019 + 16500877-16501029,16501184-16501240,16501560-165016... 29 3.8
10_02_0166 - 6065088-6065093,6066671-6068544,6068643-6069548,606... 28 5.1
01_05_0445 + 22318179-22318229,22321063-22321659,22321795-223221... 28 5.1
01_01_0981 + 7766025-7766753 28 5.1
03_01_0292 + 2255011-2255564,2256491-2256701,2256792-2256902,225... 28 6.7
10_08_0958 - 21804938-21805729,21805896-21806006,21806227-218064... 27 8.9
07_03_1608 - 28125301-28126063,28127030-28127139,28127222-281277... 27 8.9
06_01_1137 + 9412230-9412378,9412549-9412634,9413417-9413496,941... 27 8.9
01_05_0462 - 22451250-22451525,22451788-22451958,22452182-22452457 27 8.9
01_01_0963 - 7577207-7577992,7578506-7578622,7578711-7578921,757... 27 8.9
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 27 8.9
>03_02_0961 +
12759701-12760054,12760294-12760420,12760719-12761167,
12761369-12761590,12761672-12761980,12762092-12762430,
12762504-12762584,12762661-12762756,12762846-12763220,
12763400-12763531,12763962-12764132
Length = 884
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/74 (25%), Positives = 45/74 (60%)
Frame = +3
Query: 321 LKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKVGRWD 500
+ ++ N + + ++ K+L + +++ V+ PL K + E+++R Y ++KK+V +W+
Sbjct: 184 IHDLLNNIQGKPGYSKLRKRLQQQEKKPIVVQAPLAKVEREKLERGVVYQQSKKEVTKWE 243
Query: 501 PIVARSRTVDQVFF 542
P+V R+R ++F
Sbjct: 244 PLVKRNREAPTLYF 257
>03_05_0868 +
28385066-28385478,28386050-28386167,28386365-28386726,
28389308-28389406,28389485-28389890
Length = 465
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +3
Query: 264 EPTNINSEFNL---IKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKP 434
+PT+++ E ++ +++S + +L ++ +LSDT I K + ++ ++K K + KP
Sbjct: 216 DPTSLSGENSVNGGVQESARKLLSELT-MLSDTTIDPSIPKPVFQTSSKTKTFDKGIAKP 274
Query: 435 QVERIK-RATGYLETKKKVGRW 497
+ K R T ET+ K G W
Sbjct: 275 KFSAGKGRET--TETEMKKGDW 294
>10_02_0129 +
5584585-5584732,5586567-5586968,5587038-5587106,
5587181-5587234,5587309-5588214,5588313-5590283,
5590833-5591235,5591845-5591857
Length = 1321
Score = 31.5 bits (68), Expect = 0.54
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 165 IDDIEHIASDHDQLISVISKLDKTQHIIEPTRN 263
+++IEH + +HD V S + + H+++PT N
Sbjct: 234 LNEIEHDSVEHDPYDHVYSNIPRNTHVLKPTAN 266
>05_01_0025 -
171012-171263,171361-171450,171536-171592,171907-171939,
172050-172124,172219-172308,172421-172522,172725-172795,
173326-173479,173587-173663,174183-174219
Length = 345
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 177 EHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTA 356
+H+A D+ V LD+TQ IIE TR+E T I+ + + ++ +S+ V ++ S
Sbjct: 151 KHLAGRIDR---VDISLDETQEIIEGTRDEVTVIHGDLSAFQEDLQSVNLVVRSLESKLV 207
Query: 357 S 359
S
Sbjct: 208 S 208
>01_01_0085 -
639959-640192,640290-640379,640465-640521,640826-640858,
640972-641046,641141-641230,641343-641444,641643-641713,
642243-642396,642497-642573,643077-643113
Length = 339
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 177 EHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTA 356
+H+A D+ V LD+TQ IIE TR+E T I+ + + ++ +S+ V ++ S
Sbjct: 151 KHLAGRIDR---VDISLDETQEIIEGTRDEVTVIHGDLSAFQEDLQSVNLVVRSLESKLV 207
Query: 357 S 359
S
Sbjct: 208 S 208
>10_08_0309 +
16666047-16666543,16666626-16666836,16666925-16667035,
16667130-16667918
Length = 535
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 255 WALLYAEFYLIWKSH*LVDHGPKL 184
W+ Y EF+L W S L++HG ++
Sbjct: 319 WSTEYGEFFLSWYSQMLLEHGERV 342
>11_01_0334 +
2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/91 (25%), Positives = 44/91 (48%)
Frame = +3
Query: 156 MEGIDDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVS 335
+ G+ D+ A+ DQL +++ + E T +P I N ++++ + KN+
Sbjct: 192 LAGLQDVYRPAAI-DQL-TILGEQVGVPVYSEGTEAKPAQITK--NAVEEAKR---KNID 244
Query: 336 NILSDTASHVEITKKLLKSQEESKVLSKPLE 428
I+ DTA ++I K ++ +E K P E
Sbjct: 245 AIVMDTAGRLQIDKSMMVELKEVKKAVNPTE 275
>03_04_0019 +
16500877-16501029,16501184-16501240,16501560-16501668,
16501837-16502021,16502103-16502182,16502869-16503085,
16503394-16503633,16503720-16504028
Length = 449
Score = 28.7 bits (61), Expect = 3.8
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +3
Query: 165 IDDIEHI-ASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNI 341
++ +HI +H ++ S SKL+ + + PT I + ++ SI ++V ++
Sbjct: 281 VEPYQHIPVVEHGEITSEESKLEVKVDSDDDSNGTPTTIEEKETHVEAPGTSIKESVQDV 340
Query: 342 LSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKVGRWDPIV 509
+ HV L SQ V K +EK V +I+ ++ K K G +P V
Sbjct: 341 VIGGGHHVVKDVALTISQAIGPV-EKGVEK-GVGKIQDTFHHISLKPK-GEKEPEV 393
>10_02_0166 -
6065088-6065093,6066671-6068544,6068643-6069548,
6069623-6069676,6069751-6069808
Length = 965
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 165 IDDIEHIASDHDQLISVISKLDKTQHIIEPTRN 263
+++IE + +HD V S + + H+++PT N
Sbjct: 47 LNEIEQDSVEHDPYDHVYSNIPRNTHVLKPTAN 79
>01_05_0445 +
22318179-22318229,22321063-22321659,22321795-22322187,
22323410-22323481
Length = 370
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 240 HIIEPTRNEPTNINSEFNLIKKSNKSILK-NVSNILSDTASHVEITKKLLKSQEESKVLS 416
H++ R +N F ++K SI K + ++ILS+T ++++ ++ ++ E K +S
Sbjct: 189 HVMSERRRRE-KLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKVS 247
Query: 417 KPLE-KPQVERI 449
+P + KP E I
Sbjct: 248 RPAKRKPCSETI 259
>01_01_0981 + 7766025-7766753
Length = 242
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 503 HCCSQSNSGPGFLSFEKKQKIDCSQRKPSFQN 598
HCCS + PG +D + +P+FQN
Sbjct: 43 HCCSSHHLWPGHHHIVVPVTVDAATGRPTFQN 74
>03_01_0292 +
2255011-2255564,2256491-2256701,2256792-2256902,
2257020-2257814
Length = 556
Score = 27.9 bits (59), Expect = 6.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 255 WALLYAEFYLIWKSH*LVDHGPKL 184
W Y EF++ W S L++HG ++
Sbjct: 337 WNTPYGEFFMSWYSQMLLEHGERI 360
>10_08_0958 -
21804938-21805729,21805896-21806006,21806227-21806437,
21807390-21807910
Length = 544
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 255 WALLYAEFYLIWKSH*LVDHGPKLCA 178
W Y +F+L W S L++HG ++ A
Sbjct: 326 WCTEYGDFFLGWYSGMLLEHGDRVLA 351
>07_03_1608 -
28125301-28126063,28127030-28127139,28127222-28127716,
28127797-28128000
Length = 523
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 255 WALLYAEFYLIWKSH*LVDHGPKLCAL 175
W Y +F+L W + LV HG ++ A+
Sbjct: 316 WQSAYGDFFLSWYAGQLVGHGDRVLAV 342
>06_01_1137 +
9412230-9412378,9412549-9412634,9413417-9413496,
9413826-9413881,9414038-9414086,9414692-9414841,
9414993-9415088,9415442-9415555,9415655-9415785,
9416171-9416408,9416603-9416656,9417100-9417117,
9417906-9418722,9418797-9418846
Length = 695
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/102 (21%), Positives = 48/102 (47%)
Frame = +3
Query: 183 IASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASH 362
IA + + ++ +L+ + + + E + N + S+K+ L+ +ILSD
Sbjct: 251 IARNEQRTSQLMEELENLEETLNDSIRESLGARTG-NSNRGSHKASLEEEDDILSDEDDF 309
Query: 363 VEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKV 488
+ TKK S + S+ + + +++ T +E+KKK+
Sbjct: 310 YDRTKKKSSSHKSSEQQVETADS-LLDKKDTITSDIESKKKL 350
>01_05_0462 - 22451250-22451525,22451788-22451958,22452182-22452457
Length = 240
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 421 GLLKTLDSSWLFSNFFVISTCEAVSL 344
GLL+T+ SSW + F + TC + L
Sbjct: 214 GLLETMKSSWKTTTFCLFVTCSLLKL 239
>01_01_0963 -
7577207-7577992,7578506-7578622,7578711-7578921,
7579406-7579442,7580781-7580902,7581292-7581500
Length = 493
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 255 WALLYAEFYLIWKSH*LVDHGPKLC 181
W Y F+L W S L+ HG +LC
Sbjct: 278 WNTPYGRFFLEWYSGMLLLHGERLC 302
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +3
Query: 198 DQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITK 377
D+L+SV + K Q +E T NE +I + +KK + K + S + V+ K
Sbjct: 572 DELVSVKEMVHKGQEELEATSNELASIVEARDNLKKELLDVFKKLE---STSQELVDERK 628
Query: 378 KLLKSQEESKVLSKPLE 428
+ E + L K L+
Sbjct: 629 TVTTLNRELEALVKQLQ 645
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,355,971
Number of Sequences: 37544
Number of extensions: 267733
Number of successful extensions: 710
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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