Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18g06
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 33 0.12
AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical... 33 0.16
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 32 0.37
AL023815-5|CAA19428.2| 366|Caenorhabditis elegans Hypothetical ... 32 0.37
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 32 0.37
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 32 0.37
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 31 0.65
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 31 0.65
AC006608-9|AAF39760.1| 166|Caenorhabditis elegans Hypothetical ... 31 0.86
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 30 1.1
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical p... 29 2.0
Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical pr... 29 2.0
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 29 2.6
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 29 2.6
AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical ... 29 3.5
Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z75554-7|CAA99960.1| 297|Caenorhabditis elegans Hypothetical pr... 28 6.0
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 6.0
AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical ... 28 6.0
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 27 8.0
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 33.5 bits (73), Expect = 0.12
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +3
Query: 219 SKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQE 398
+K D T + T + P+ ++ +L +S K S+ + TKK LKS
Sbjct: 36 TKTDATSLLSHLTVSRPSTNKAKQSLGIGGLESTEKTGKKRKSEATADETTTKKKLKS-- 93
Query: 399 ESKVLSKPLEKPQVER-IKRATGYLETKKKVGR-WDPIVARSRTVDQVFFPLKK 554
K L PL+ + + I+ + + KK+V + W +V +R DQ+ FPL K
Sbjct: 94 --KTLI-PLKDVEARKEIEGKIAFTDLKKEVTQNWTELVQSNRVSDQLIFPLTK 144
>AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical
protein Y111B2A.5a protein.
Length = 434
Score = 33.1 bits (72), Expect = 0.16
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Frame = +3
Query: 168 DDIEHIASDHDQLISVISKLDKTQHIIEPTR----NEPTNINS--EFNLIKKS--NKSIL 323
+++ H+ L S +S +++ ++ + NE T + E +L + ++ +L
Sbjct: 236 NEVSHLKRYIADLQSKLSTMEEELKVLREQKLDENNEATQVRQMLERDLFEAEEVDRGLL 295
Query: 324 KNVSNILSDTASHVEITKKLLK-SQEESKVLSKPLEKPQVERI 449
+ + N + + +E K LK ++EES L K LEK + ERI
Sbjct: 296 EGIENRVKEMEDQLEAKVKALKEAKEESSKLEKKLEKAEKERI 338
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 31.9 bits (69), Expect = 0.37
Identities = 22/95 (23%), Positives = 49/95 (51%)
Frame = +3
Query: 168 DDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILS 347
++I+ +D D L +++ L +H I+ + ++ E LI+K K + L
Sbjct: 338 EEIKESRADVDNLRKIVNDL---KHEIKMSESQMRRKKVEIMLIRKEIAKAQKQLREALG 394
Query: 348 DTASHVEITKKLLKSQEESKVLSKPLEKPQVERIK 452
H E+TKKL +++++ + L+ +E+ + ++K
Sbjct: 395 KFG-HEELTKKLAEAEDKRESLNIEIEEIEHVQLK 428
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 31.9 bits (69), Expect = 0.37
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +3
Query: 228 DKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESK 407
+K Q E +NSE N++ + K + ++ +L+ + E+T+KL +S++E+
Sbjct: 109 EKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETS 168
Query: 408 VLSKPLE 428
LE
Sbjct: 169 TAKTELE 175
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 31.9 bits (69), Expect = 0.37
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +3
Query: 228 DKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESK 407
+K Q E +NSE N++ + K + ++ +L+ + E+T+KL +S++E+
Sbjct: 109 EKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETS 168
Query: 408 VLSKPLE 428
LE
Sbjct: 169 TAKTELE 175
>AL023815-5|CAA19428.2| 366|Caenorhabditis elegans Hypothetical
protein H28O16.2 protein.
Length = 366
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +3
Query: 183 IASDHDQLISVISKLDKTQHIIEPTRNEPTNINS--EFNLIKKSNKSILKNVSNILSDTA 356
+A D++I ++ + + IE T E T +F I++ N+ I ++
Sbjct: 1 MADKLDEIIDKVASGQRKKDTIEDTEEEGTRKRKIEQFEDIERPNELSGFKKQKIEENSE 60
Query: 357 SHVEITKKLLKSQEESKVLSKPLEKPQVERIK 452
H E T++ +++Q V+ KP E+P+++R K
Sbjct: 61 IHAEETEESVEAQ---MVMKKPSEEPELKRRK 89
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 31.9 bits (69), Expect = 0.37
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Frame = +3
Query: 156 MEGIDDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNV- 332
ME +++ S+H++L S + K++K +I N + + L++ +NK + ++
Sbjct: 412 MENEAELKKARSEHEKLRSKLEKIEKK--LIVGGENLLEKVEEQAKLLEVNNKELEQSKF 469
Query: 333 ------SNILSDTASHVEITKKLLKSQEESKVLSKPLEK 431
+ + TA VEI ++ QEE+ V SK ++K
Sbjct: 470 QEAHLRTQLEERTAVKVEIEERYSSLQEEAFVKSKKIKK 508
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 31.9 bits (69), Expect = 0.37
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Frame = +3
Query: 156 MEGIDDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNV- 332
ME +++ S+H++L S + K++K +I N + + L++ +NK + ++
Sbjct: 414 MENEAELKKARSEHEKLRSKLEKIEKK--LIVGGENLLEKVEEQAKLLEVNNKELEQSKF 471
Query: 333 ------SNILSDTASHVEITKKLLKSQEESKVLSKPLEK 431
+ + TA VEI ++ QEE+ V SK ++K
Sbjct: 472 QEAHLRTQLEERTAVKVEIEERYSSLQEEAFVKSKKIKK 510
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 31.1 bits (67), Expect = 0.65
Identities = 25/104 (24%), Positives = 43/104 (41%)
Frame = +3
Query: 177 EHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTA 356
EH+ DH S+ + Q++I T P N+ L+ ++S+ N+ S+
Sbjct: 772 EHVGCDHCSKSSLNHSIPSLQNVI--TSTSPYTDNAVI-LVSSKDRSL--NILGFRSNNM 826
Query: 357 SHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKV 488
++ +E+ K +PL VE + LE KKV
Sbjct: 827 GFANFPYNVVMLKEDLKGSEEPLTDLTVESLVEKVETLEVTKKV 870
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 31.1 bits (67), Expect = 0.65
Identities = 25/104 (24%), Positives = 43/104 (41%)
Frame = +3
Query: 177 EHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTA 356
EH+ DH S+ + Q++I T P N+ L+ ++S+ N+ S+
Sbjct: 772 EHVGCDHCSKSSLNHSIPSLQNVI--TSTSPYTDNAVI-LVSSKDRSL--NILGFRSNNM 826
Query: 357 SHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKV 488
++ +E+ K +PL VE + LE KKV
Sbjct: 827 GFANFPYNVVMLKEDLKGSEEPLTDLTVESLVEKVETLEVTKKV 870
>AC006608-9|AAF39760.1| 166|Caenorhabditis elegans Hypothetical
protein C15F1.8 protein.
Length = 166
Score = 30.7 bits (66), Expect = 0.86
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 237 QHIIEPTRNEPTNINSEFNLIKKSNKSI---LKNVSNILSDTASHVEITKKLLKSQEESK 407
Q IE T+ + + FN+ KK+N +I K + + T HVE ++L K +++ K
Sbjct: 81 QFEIEDTKKKISAAILNFNISKKANNAIRSERKRIVATILKTRKHVERFRRLWKKEKKKK 140
Query: 408 VLSKPLEK 431
S+ L K
Sbjct: 141 EHSEILYK 148
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 249 EPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEES 404
EP + ++ + + KS K +S I+SD+ H+EI +K +S + +
Sbjct: 582 EPVVSNALDVIQKIKNVSKSTLDSAKTISKIVSDSRQHLEILQKSGQSMKSA 633
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 498 PTDQLSFLFLNILSLALYAQPVVFLMV 418
P D SF FLN + +Y P+ FL V
Sbjct: 1476 PLDLASFPFLNTFDIQIYGTPIAFLQV 1502
>Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical
protein K08E3.5f protein.
Length = 493
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 258 RNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQ 437
RN+ T ++ I+ NK+ +V +L ++ + E T+K+LK KV + Q
Sbjct: 119 RNDLTFLDLTMQQIQTLNKTYGVDVPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQ 178
Query: 438 VERIKRAT 461
RI R T
Sbjct: 179 YPRINRET 186
>Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical
protein K08E3.5e protein.
Length = 496
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 258 RNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQ 437
RN+ T ++ I+ NK+ +V +L ++ + E T+K+LK KV + Q
Sbjct: 122 RNDLTFLDLTMQQIQTLNKTYGVDVPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQ 181
Query: 438 VERIKRAT 461
RI R T
Sbjct: 182 YPRINRET 189
>Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical
protein K08E3.5d protein.
Length = 497
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 258 RNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQ 437
RN+ T ++ I+ NK+ +V +L ++ + E T+K+LK KV + Q
Sbjct: 123 RNDLTFLDLTMQQIQTLNKTYGVDVPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQ 182
Query: 438 VERIKRAT 461
RI R T
Sbjct: 183 YPRINRET 190
>Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical
protein K08E3.5c protein.
Length = 511
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 258 RNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQ 437
RN+ T ++ I+ NK+ +V +L ++ + E T+K+LK KV + Q
Sbjct: 137 RNDLTFLDLTMQQIQTLNKTYGVDVPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQ 196
Query: 438 VERIKRAT 461
RI R T
Sbjct: 197 YPRINRET 204
>Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical
protein K08E3.5b protein.
Length = 522
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 258 RNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQ 437
RN+ T ++ I+ NK+ +V +L ++ + E T+K+LK KV + Q
Sbjct: 148 RNDLTFLDLTMQQIQTLNKTYGVDVPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQ 207
Query: 438 VERIKRAT 461
RI R T
Sbjct: 208 YPRINRET 215
>Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical
protein K08E3.5a protein.
Length = 509
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 258 RNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQ 437
RN+ T ++ I+ NK+ +V +L ++ + E T+K+LK KV + Q
Sbjct: 135 RNDLTFLDLTMQQIQTLNKTYGVDVPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQ 194
Query: 438 VERIKRAT 461
RI R T
Sbjct: 195 YPRINRET 202
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 312 KSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKV- 488
K+++KN L T S +I ++ + +E++ + K LEK +R+K E +++
Sbjct: 482 KNLMKNEIESLRQTFSDAKI--RIRELEEDANIFRKDLEKADDDRLKLDAALKEANEEID 539
Query: 489 GRWDPIVARSRTVDQV 536
+ IVA T +++
Sbjct: 540 SKAAEIVASLNTANRL 555
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 312 KSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKV- 488
K+++KN L T S +I ++ + +E++ + K LEK +R+K E +++
Sbjct: 482 KNLMKNEIESLRQTFSDAKI--RIRELEEDANIFRKDLEKADDDRLKLDAALKEANEEID 539
Query: 489 GRWDPIVARSRTVDQV 536
+ IVA T +++
Sbjct: 540 SKAAEIVASLNTANRL 555
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 29.1 bits (62), Expect = 2.6
Identities = 26/109 (23%), Positives = 45/109 (41%)
Frame = +3
Query: 225 LDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEES 404
L Q +E + N E +KKS S + + T ++ KKL K Q+E
Sbjct: 227 LKDNQEGLEKIAKDVKNKEGEIEELKKSVSSEIVKATEAAHATD---QLRKKLQKQQDEH 283
Query: 405 KVLSKPLEKPQVERIKRATGYLETKKKVGRWDPIVARSRTVDQVFFPLK 551
+ + K ++E +K G L +K++ D + + T + LK
Sbjct: 284 EKRVEQEHKKEIEDLK---GALAAEKRISEADKVELKKLTEELQSMHLK 329
>AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical
protein Y6B3B.9 protein.
Length = 485
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 294 LIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPL 425
++ S KS +++ S SDT V +KLLK +S V S+P+
Sbjct: 380 ILNISTKSHVESPSTSSSDTVHTVSDLQKLLKKSSKSVVKSEPV 423
>Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical
protein K08E7.3 protein.
Length = 698
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 387 KSQEESKVLSKPLEKPQVERIKRATGYLETKKKVGRWDPIVARSRTVDQVFFPLKKS 557
K Q K+L++ LE E E K+KV W P R +V P ++S
Sbjct: 190 KKQRTPKILNRSLESICTEEYTEKREVSEMKEKVYDWLPFFKSRRNHTKVNQPTRRS 246
>Z75554-7|CAA99960.1| 297|Caenorhabditis elegans Hypothetical
protein ZC455.9 protein.
Length = 297
Score = 27.9 bits (59), Expect = 6.0
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1
Query: 299 YQIKF*IDVCGLVACGLYYM 240
YQI+F +D+C +A +YY+
Sbjct: 48 YQIRFFVDICYSIAVSIYYV 67
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 6.0
Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Frame = +3
Query: 201 QLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKK 380
+L IS D + ++ +E N ++ + + N+ I D +E+T +
Sbjct: 1509 ELQDSISNKDDFGKNVHELEKAKRSLEAELNDMRVQMEELEDNLQ-IAEDARLRLEVTNQ 1567
Query: 381 LLKSQEESKVLSKPLEKPQ-----VERIKRATGYLETKKKVGRWDPIVARSRTVDQV 536
LKS+ + + +K +E + +++I+ LE +K+ G+ + R + +Q+
Sbjct: 1568 ALKSESDRAISNKDVEAEEKRRGLLKQIRDLENELENEKR-GKSGAVSHRKKIENQI 1623
>AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical
protein C05C8.6 protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 243 IIEPTRNEPTNINSEFNLIKKSNKSILKNVSNI 341
I+E R E I++ FN + NKS+++++ +
Sbjct: 18 IVETMRTESAAISNNFNAVNSVNKSVVQHLDEL 50
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 27.5 bits (58), Expect = 8.0
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +3
Query: 276 INSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKS-------QEESKVLSKPLEKP 434
+N ++ ++ L NVSN + A I ++LKS Q K+++ ++K
Sbjct: 219 VNKPSHIANLKSQLTLVNVSNFSNPPAYGARIVHEILKSPKYREQWQNSIKMMAFRIKKT 278
Query: 435 QVERIKRATGYLETKKKVGRWDPIVARS 518
+ E I R L+T G+WD I +S
Sbjct: 279 RQELI-RELNMLQTS---GKWDRITQQS 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,441,018
Number of Sequences: 27780
Number of extensions: 278008
Number of successful extensions: 937
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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