Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18f20
(527 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26H5.10c |tif51||translation initiation factor eIF5A|Schizos... 217 8e-58
SPBC336.10c |tif512||translation initiation factor|Schizosacchar... 214 6e-57
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 0.99
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 2.3
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 27 2.3
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 27 2.3
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 27 2.3
SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|ch... 27 2.3
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 26 3.0
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 26 4.0
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 25 5.3
SPBC16E9.17c |rem1||meiosis-specific cyclin Rem1|Schizosaccharom... 25 7.0
SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|ch... 25 9.2
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 9.2
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 25 9.2
>SPAC26H5.10c |tif51||translation initiation factor
eIF5A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 217 bits (530), Expect = 8e-58
Identities = 95/153 (62%), Positives = 124/153 (81%)
Frame = +1
Query: 67 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 246
M + E FE G++GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 247 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 426
V +DIFNG+KYED+ PSTHNMDVP VKR++YQL +I DDGYL LM +G ++D+++P+G
Sbjct: 61 VALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEG 119
Query: 427 DLGTQLRTDFDSGRELLCTVLKSCGEECVIAVK 525
+LG ++ FD GR+L+ TV+ + GEE +A +
Sbjct: 120 ELGNEIEEGFDEGRDLIITVVSAMGEETALACR 152
>SPBC336.10c |tif512||translation initiation
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 157
Score = 214 bits (523), Expect = 6e-57
Identities = 93/153 (60%), Positives = 124/153 (81%)
Frame = +1
Query: 67 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 246
M + E FE G++GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 247 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 426
V +DIFNG+KYED+ PSTHNMDVP VKR++YQL +I DDGYL LM +G ++D+++P+G
Sbjct: 61 VALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEG 119
Query: 427 DLGTQLRTDFDSGRELLCTVLKSCGEECVIAVK 525
+LG ++ F+ G++L+ TV+ + GEE +A +
Sbjct: 120 ELGNEIEEGFEEGKDLIITVVSAMGEEIALACR 152
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 0.99
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -1
Query: 527 ALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
+LTA+ S+P S+V N+S P++ S V P + S ++ SS
Sbjct: 2570 SLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 2613
Score = 27.1 bits (57), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S V P + S +L SS
Sbjct: 1420 TVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSS 1461
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
+ + S+P STV N S P++ S V + P + S +L SS
Sbjct: 820 SVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSSVLNSS 861
Score = 26.2 bits (55), Expect = 3.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSSRRSPLSAI 378
T + S+P STV N+S P++ S + P + S +L SS S+I
Sbjct: 1192 TVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSI 1241
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
+ + S+P STV N+S P++ S + +P + S +L SS
Sbjct: 1252 SVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSS 1293
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 1372 TVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 1413
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1732 TVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1773
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2212 TVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2253
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2500 TVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2541
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2800 TVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2841
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 484 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 525
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 892 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 933
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1048 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1089
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1504 TVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSS 1545
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1828 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1869
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2020 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2061
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2284 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2325
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2596 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2637
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2692 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2733
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2920 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2961
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3280 TVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSS 3321
Score = 25.4 bits (53), Expect = 5.3
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
+ + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2488 SVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2529
Score = 25.4 bits (53), Expect = 5.3
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
+ + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2788 SVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2829
Score = 25.4 bits (53), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -1
Query: 515 MTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSSRRSPLSAI 378
+ S+P STV N+S P++ S + P + S +L SS S+I
Sbjct: 3138 LNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSI 3185
Score = 25.4 bits (53), Expect = 5.3
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
TA+ S+P STV N+S P++ S + + + S IL SS
Sbjct: 3424 TALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSS 3465
Score = 25.0 bits (52), Expect = 7.0
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
+ + S+P STV N+S P++ S + P + S +L SS
Sbjct: 952 SVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 993
Score = 25.0 bits (52), Expect = 7.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N S P++ S V + P + S +L +S
Sbjct: 1180 TVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTS 1221
Score = 25.0 bits (52), Expect = 7.0
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 1348 TVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 1389
Score = 25.0 bits (52), Expect = 7.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N S P++ S V + P + S +L +S
Sbjct: 1492 TVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTS 1533
Score = 25.0 bits (52), Expect = 7.0
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
+ + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1888 SVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 1929
Score = 25.0 bits (52), Expect = 7.0
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
+ + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2080 SVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 2121
Score = 25.0 bits (52), Expect = 7.0
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 2188 TVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 2229
Score = 25.0 bits (52), Expect = 7.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S V P + S ++ SS
Sbjct: 2260 TVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSS 2301
Score = 25.0 bits (52), Expect = 7.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3016 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSTVLNSS 3057
Score = 25.0 bits (52), Expect = 7.0
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
+ + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3364 SVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 3405
Score = 24.6 bits (51), Expect = 9.2
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 515 MTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
+ S+P STV N+S P++ S + P + S +L SS
Sbjct: 426 LNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 465
Score = 24.6 bits (51), Expect = 9.2
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
+ + S+P STV N S P++ S + P + S +L SS
Sbjct: 1108 SVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS 1149
Score = 24.6 bits (51), Expect = 9.2
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
+ + S+P STV N S P++ S + P + S +L SS
Sbjct: 2752 SVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS 2793
Score = 24.6 bits (51), Expect = 9.2
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 521 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 402
TA+ S+P STV N+S P++ S + + P + S L +S
Sbjct: 3040 TALNTSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTS 3081
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.6 bits (56), Expect = 2.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 304 NMDVPHVKREDYQLTDISDDGYL 372
NM +P+++ E Q+ D + D YL
Sbjct: 968 NMSIPYIRGEYVQMIDANQDNYL 990
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 127 PMQCSALRKNGFVMLKGRPCKIVEMSTSKTGK-HGHAKVHLVGIDIFNGKKY 279
P +CS ++ ++ C V G+ H H++G+D+ NG Y
Sbjct: 35 PRRCSTCKRINKRSIRCLSCHSVGCLWGHHGEEHAMEHTHMIGVDVKNGHTY 86
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 220 KHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDY 339
K A L+ D F+G ++ IC S N+ + V ED+
Sbjct: 878 KEADAYAPLLAYDKFDGDEFACICESMKNVKLDFVTLEDW 917
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 26.6 bits (56), Expect = 2.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 211 KTGKHGHAKVHLVGIDIFNGK-KYEDICPSTHNMDVPHVKRED 336
K G+H A +++ + N K +D CPST D+ H+ R D
Sbjct: 164 KIGQHLSAMGYVIPKEWTNTMVKLQDRCPSTSLKDIDHLFRVD 206
>SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 204
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 159 FRYAEGSSMQDC*NVHIQNRKARPR*SSLGWD 254
+ + E +Q C N+ +N +A R SS GWD
Sbjct: 41 YHHLEKGLLQQCFNLVKKNMEALYRQSSFGWD 72
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -2
Query: 403 HAGHRCQPSGSGSHHPRYQSVGSLRASRGVRP 308
H G P+ PR + GS A+RG RP
Sbjct: 957 HVGTGLPPTSKSKPFPRLATGGSTAAARGPRP 988
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 25.8 bits (54), Expect = 4.0
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = +2
Query: 5 SVEEPVGHISFLTVVKFKTQQWVTSKTHTSRPETPGPQPPSPCNVRPCVKTVSLC*RVVH 184
S E+P+ +S L+ TS + P P P PP+ + P + + ++ +
Sbjct: 222 STEKPLLSVSALSSSSHLQPTSATSSSSRLYPSRPAPTPPASSSSSPLLSSQTV--KTTT 279
Query: 185 ARLLKCPHPKPESTAT 232
+ + P P S +T
Sbjct: 280 SNASRQPSPLVSSKST 295
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 25.4 bits (53), Expect = 5.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 322 VKREDYQLTDISDDGYL 372
+KREDY+LT ++ GYL
Sbjct: 91 IKREDYELTLCANCGYL 107
>SPBC16E9.17c |rem1||meiosis-specific cyclin
Rem1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 25.0 bits (52), Expect = 7.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 303 VCGGTDIFILFTIEDINPNQVNFSVAVLSG 214
+CG T +FI E+I+P V VL G
Sbjct: 219 LCGATALFIACKYEEIHPPTVKDLEIVLEG 248
>SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 679
Score = 24.6 bits (51), Expect = 9.2
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -3
Query: 477 QQFPAAVEVSTQLCAEVTIRNFEVLTQVTVVSHQGQVAIIRDISQLVVFALHV 319
+ F +V+ + E+ RN V+ +VTV SH+ V + + V L V
Sbjct: 606 EPFERSVDPNNADIVEMVERNGIVVPKVTVTSHEDDVDSVHNTPMSVSSTLSV 658
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 24.6 bits (51), Expect = 9.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 439 QLRTDFDSGRELLCTVLKSCG 501
QL+ F E LCT+L SCG
Sbjct: 522 QLQNGFIPTCERLCTILLSCG 542
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 24.6 bits (51), Expect = 9.2
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 142 ALRKNGFVMLKGRPCKIV-EMSTSKTGKHGHAKVHLVGID 258
AL + + ++KGRPC+I+ K G V + +D
Sbjct: 137 ALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLD 176
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,354,711
Number of Sequences: 5004
Number of extensions: 50415
Number of successful extensions: 273
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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