Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18f12
         (614 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK024290-1|BAB14875.1|  590|Homo sapiens protein ( Homo sapiens ...    31   3.2  
AB040956-1|BAA96047.1|  687|Homo sapiens KIAA1523 protein protein.     31   3.2  
BC005233-1|AAH05233.1|  186|Homo sapiens PNLIPRP1 protein protein.     30   7.5  
U91522-1|AAC68813.1|  359|Homo sapiens peroxin 12 protein.             29   9.9  
U91521-1|AAC68812.1|  359|Homo sapiens peroxin 12 protein.             29   9.9  
BC031085-1|AAH31085.1|  359|Homo sapiens peroxisomal biogenesis ...    29   9.9  
BC015751-1|AAH15751.1|  324|Homo sapiens Unknown (protein for IM...    29   9.9  
AB004546-1|BAA31559.1|  359|Homo sapiens peroxisome assembly fac...    29   9.9  

>AK024290-1|BAB14875.1|  590|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14228 fis, clone NT2RP3004148. ).
          Length = 590

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 88  YDDNTDYNIAVIYSEYDITTQTVFVSGDDSLVSPPPP 198
           YD+NT +   + YSE+  T   V  S D S  +PP P
Sbjct: 431 YDENTKHYELLNYSEHGTTVDNVLYSCDFSEKTPPTP 467


>AB040956-1|BAA96047.1|  687|Homo sapiens KIAA1523 protein protein.
          Length = 687

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 88  YDDNTDYNIAVIYSEYDITTQTVFVSGDDSLVSPPPP 198
           YD+NT +   + YSE+  T   V  S D S  +PP P
Sbjct: 528 YDENTKHYELLNYSEHGTTVDNVLYSCDFSEKTPPTP 564


>BC005233-1|AAH05233.1|  186|Homo sapiens PNLIPRP1 protein protein.
          Length = 186

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -3

Query: 528 YFEGEFLFLGTFTAKEIKKRALVNHLICWQESPERVAERVAY 403
           Y  G F+ L  F+++++K  ++  H IC  + P  + E+ +Y
Sbjct: 140 YILGNFMQLKCFSSQKLKCLSMFPHYICTLKQPHLLLEKYSY 181


>U91522-1|AAC68813.1|  359|Homo sapiens peroxin 12 protein.
          Length = 359

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 175 SLVSPPPPAHPDWDAVSPLL 234
           +L +PPPP H D+++ SPLL
Sbjct: 278 ALPTPPPPVHLDYNSDSPLL 297


>U91521-1|AAC68812.1|  359|Homo sapiens peroxin 12 protein.
          Length = 359

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 175 SLVSPPPPAHPDWDAVSPLL 234
           +L +PPPP H D+++ SPLL
Sbjct: 278 ALPTPPPPVHLDYNSDSPLL 297


>BC031085-1|AAH31085.1|  359|Homo sapiens peroxisomal biogenesis
           factor 12 protein.
          Length = 359

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 175 SLVSPPPPAHPDWDAVSPLL 234
           +L +PPPP H D+++ SPLL
Sbjct: 278 ALPTPPPPVHLDYNSDSPLL 297


>BC015751-1|AAH15751.1|  324|Homo sapiens Unknown (protein for
           IMAGE:4859795) protein.
          Length = 324

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 175 SLVSPPPPAHPDWDAVSPLL 234
           +L +PPPP H D+++ SPLL
Sbjct: 278 ALPTPPPPVHLDYNSDSPLL 297


>AB004546-1|BAA31559.1|  359|Homo sapiens peroxisome assembly
           factor-3 (PAF-3) protein.
          Length = 359

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 175 SLVSPPPPAHPDWDAVSPLL 234
           +L +PPPP H D+++ SPLL
Sbjct: 278 ALPTPPPPVHLDYNSDSPLL 297


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,482,494
Number of Sequences: 237096
Number of extensions: 1983728
Number of successful extensions: 4762
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4755
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)