Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18f08
         (441 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-769|AAN13390.1|  778|Drosophila melanogaster CG8007-PB,...    28   4.9  
AY113347-1|AAM29352.1|   77|Drosophila melanogaster GH16383p pro...    28   6.5  
AY071223-1|AAL48845.1|  157|Drosophila melanogaster RE26473p pro...    27   8.6  
AE014134-347|AAF51298.1|  157|Drosophila melanogaster CG15382-PA...    27   8.6  

>AE014297-769|AAN13390.1|  778|Drosophila melanogaster CG8007-PB,
           isoform B protein.
          Length = 778

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +3

Query: 150 TSCNKNQTRKIIICVITGGRTSCASARVGTTAPPISAVKQ 269
           +S NK      +   ITGG    A A VG+T  P SA  Q
Sbjct: 510 SSGNKKSLTSSVSAGITGGPAGAAPATVGSTLSPHSAHNQ 549


>AY113347-1|AAM29352.1|   77|Drosophila melanogaster GH16383p
           protein.
          Length = 77

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 215 LCVRTGRYHRPAYFCREA-VMRFGLKGGAAVVTILRP*NYISRCVAHLS 358
           +  R   YHRP  + +   ++RFG + G  +V ++      S C A  S
Sbjct: 1   MAARMSSYHRPMRWIKPMPILRFGSRSGRPLVVVVAAGFTFSYCCARAS 49


>AY071223-1|AAL48845.1|  157|Drosophila melanogaster RE26473p
           protein.
          Length = 157

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = -3

Query: 331 IVLRSQYSHNGCSTLQTETHYCFTAEIGGAVVPTRADAQEVLPPVITQ 188
           ++LR QY    C+ + T T  C           T    Q V PPV +Q
Sbjct: 42  LLLRYQYDRQVCNNIITYTESCSPTPPPAVADNTTPKDQTVRPPVASQ 89


>AE014134-347|AAF51298.1|  157|Drosophila melanogaster CG15382-PA
           protein.
          Length = 157

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = -3

Query: 331 IVLRSQYSHNGCSTLQTETHYCFTAEIGGAVVPTRADAQEVLPPVITQ 188
           ++LR QY    C+ + T T  C           T    Q V PPV +Q
Sbjct: 42  LLLRYQYDRQVCNNIITYTESCSPTPPPAVADNTTPKDQTVRPPVASQ 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,656,510
Number of Sequences: 53049
Number of extensions: 436698
Number of successful extensions: 1120
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)