Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18f07
         (506 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   3.4  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           24   3.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   4.5  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    23   7.9  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 451 PVLSHQRYSPCCIE 492
           P   H++Y PCC E
Sbjct: 224 PAERHEKYYPCCAE 237


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 22/74 (29%), Positives = 36/74 (48%)
 Frame = +3

Query: 204 VIADSLNGKHRICSSGVQQNKITQPKKVNVMEDKSNFLLPNNQRFVELDSSQAFDNLTTN 383
           ++ADSL   +   S   Q N +   +++ V+  + N L     R ++ +S   F NLT  
Sbjct: 155 LLADSLEVLYFKDSMVQQLNWLVPLQRLRVLNLRGNIL-----RMLQRES---FANLTNL 206

Query: 384 EKLYAHYLSQAAWN 425
           E+L   Y   +AWN
Sbjct: 207 EQLDLSYNYISAWN 220


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +1

Query: 211 LIH*MENIEFVLQVYNKIKSLSRKKLMS--WKTSQIFYCQITKD 336
           L+H +EN+  V+ +Y+K K ++  +  S  W+  Q +Y +   D
Sbjct: 760 LVHAIENLIVVIVIYDKCKDVAILQYTSDRWR-QQKYYDEFPLD 802


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 223 MENIEFVLQVYNKIKSLSRKKLMSWKTS 306
           MEN  +    +  I+++SRK+ +  KT+
Sbjct: 131 MENFRYKTAAFGYIRAVSRKRHVKVKTN 158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,873
Number of Sequences: 2352
Number of extensions: 9089
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)