Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18f07
         (506 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical p...    69   3e-12
Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical pr...    69   3e-12
Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical pr...    69   3e-12
U53151-4|AAB37066.1|  335|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exteri...    28   4.5  
AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector ...    28   4.5  
Z81130-6|CAB03419.4|  312|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical
           protein F02E9.9b protein.
          Length = 745

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 29/69 (42%), Positives = 49/69 (71%)
 Frame = +3

Query: 300 DKSNFLLPNNQRFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPESPKIFS 479
           D+S +++PN     +LD++ AF  L+  EK Y+HY+++A+++G L V +Q SPES  IF 
Sbjct: 42  DRSLYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPESAPIFY 101

Query: 480 LLHRVFVAE 506
           +L+R+F +E
Sbjct: 102 VLYRLFKSE 110


>Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical
           protein F02E9.9a protein.
          Length = 707

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 29/69 (42%), Positives = 49/69 (71%)
 Frame = +3

Query: 300 DKSNFLLPNNQRFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPESPKIFS 479
           D+S +++PN     +LD++ AF  L+  EK Y+HY+++A+++G L V +Q SPES  IF 
Sbjct: 4   DRSLYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPESAPIFY 63

Query: 480 LLHRVFVAE 506
           +L+R+F +E
Sbjct: 64  VLYRLFKSE 72


>Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical
           protein F02E9.9b protein.
          Length = 745

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 29/69 (42%), Positives = 49/69 (71%)
 Frame = +3

Query: 300 DKSNFLLPNNQRFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPESPKIFS 479
           D+S +++PN     +LD++ AF  L+  EK Y+HY+++A+++G L V +Q SPES  IF 
Sbjct: 42  DRSLYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPESAPIFY 101

Query: 480 LLHRVFVAE 506
           +L+R+F +E
Sbjct: 102 VLYRLFKSE 110


>U53151-4|AAB37066.1|  335|Caenorhabditis elegans Hypothetical
           protein T05B11.1 protein.
          Length = 335

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +3

Query: 249 GVQQNKITQPKKVNVMEDKSNFLLPNNQRFVELDSSQAFDNLTTNEKLY 395
           GV++++  +    +   + +N  +  N R VEL    +FD +T +E+ Y
Sbjct: 89  GVKRSERIEDPSRSTSSESANSFVQENLRKVELQEKLSFDGVTLDEEFY 137


>AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exterior
            protein 2 protein.
          Length = 1262

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 18/70 (25%), Positives = 33/70 (47%)
 Frame = +3

Query: 183  LAKCRRLVIADSLNGKHRICSSGVQQNKITQPKKVNVMEDKSNFLLPNNQRFVELDSSQA 362
            L + RR  + D     HR+  +  +   I+  +   ++E    F L NNQ F+ L++   
Sbjct: 1174 LGQHRRFEVLDFCYHLHRVNKADGKDEVISGIRLAKMVERIRRFQLLNNQIFIILENQLN 1233

Query: 363  FDNLTTNEKL 392
             +N   NE++
Sbjct: 1234 ENNDDPNERV 1243


>AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector
            protein.
          Length = 1262

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 18/70 (25%), Positives = 33/70 (47%)
 Frame = +3

Query: 183  LAKCRRLVIADSLNGKHRICSSGVQQNKITQPKKVNVMEDKSNFLLPNNQRFVELDSSQA 362
            L + RR  + D     HR+  +  +   I+  +   ++E    F L NNQ F+ L++   
Sbjct: 1174 LGQHRRFEVLDFCYHLHRVNKADGKDEVISGIRLAKMVERIRRFQLLNNQIFIILENQLN 1233

Query: 363  FDNLTTNEKL 392
             +N   NE++
Sbjct: 1234 ENNDDPNERV 1243


>Z81130-6|CAB03419.4|  312|Caenorhabditis elegans Hypothetical
           protein T23G11.7b protein.
          Length = 312

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +1

Query: 241 VLQVYNKIKS--LSRKKLMSWKTSQIFYC 321
           +L ++ +I    LS KK   WK++QIF C
Sbjct: 122 ILSLFGEIDEPFLSSKKYAKWKSTQIFTC 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,326,221
Number of Sequences: 27780
Number of extensions: 221279
Number of successful extensions: 524
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)