Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18f05
         (542 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB019510-1|BAA34362.1|  709|Drosophila melanogaster DREF transcr...    32   0.44 
BT004872-1|AAO45228.1|  709|Drosophila melanogaster LD24482p pro...    32   0.58 
AE014134-1744|AAF52841.1|  709|Drosophila melanogaster CG5838-PA...    32   0.58 
AB010823-1|BAA24827.1|  709|Drosophila melanogaster DREF protein.      32   0.58 

>AB019510-1|BAA34362.1|  709|Drosophila melanogaster DREF
           transcription factor protein.
          Length = 709

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 25/82 (30%), Positives = 41/82 (50%)
 Frame = +1

Query: 70  LTPTTLYNNNMSILNVVEACDLAHTFLKLGYLFRAKTCLDIALDNLKLLRRKTNIKEVAV 249
           LT   L N  ++I+N  E  DL HT+L+   +     C    +D  K LRR   I+EVA 
Sbjct: 346 LTDFYLANCTLAIINYDEEEDLLHTYLREKNI-PISLCYVSVID--KCLRRVFEIEEVAT 402

Query: 250 MLNKKTTECLQLKQKIDKKIAQ 315
           +L++      +   +I  K+++
Sbjct: 403 LLDQVKDLMQRHSTEIASKVSE 424


>BT004872-1|AAO45228.1|  709|Drosophila melanogaster LD24482p
           protein.
          Length = 709

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 25/82 (30%), Positives = 40/82 (48%)
 Frame = +1

Query: 70  LTPTTLYNNNMSILNVVEACDLAHTFLKLGYLFRAKTCLDIALDNLKLLRRKTNIKEVAV 249
           LT   L N  ++I+N  E  DL HT+L+   +     C    +D  K LRR   I+EVA 
Sbjct: 346 LTDFYLANCTLAIINYDEEEDLLHTYLREKNI-PISLCYVSVID--KCLRRVFEIEEVAT 402

Query: 250 MLNKKTTECLQLKQKIDKKIAQ 315
           +L +      +   +I  K+++
Sbjct: 403 LLEQVKDLMQRHSTEIASKVSE 424


>AE014134-1744|AAF52841.1|  709|Drosophila melanogaster CG5838-PA
           protein.
          Length = 709

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 25/82 (30%), Positives = 40/82 (48%)
 Frame = +1

Query: 70  LTPTTLYNNNMSILNVVEACDLAHTFLKLGYLFRAKTCLDIALDNLKLLRRKTNIKEVAV 249
           LT   L N  ++I+N  E  DL HT+L+   +     C    +D  K LRR   I+EVA 
Sbjct: 346 LTDFYLANCTLAIINYDEEEDLLHTYLREKNI-PISLCYVSVID--KCLRRVFEIEEVAT 402

Query: 250 MLNKKTTECLQLKQKIDKKIAQ 315
           +L +      +   +I  K+++
Sbjct: 403 LLEQVKDLMQRHSTEIASKVSE 424


>AB010823-1|BAA24827.1|  709|Drosophila melanogaster DREF protein.
          Length = 709

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 25/82 (30%), Positives = 40/82 (48%)
 Frame = +1

Query: 70  LTPTTLYNNNMSILNVVEACDLAHTFLKLGYLFRAKTCLDIALDNLKLLRRKTNIKEVAV 249
           LT   L N  ++I+N  E  DL HT+L+   +     C    +D  K LRR   I+EVA 
Sbjct: 346 LTDFYLANCTLAIINYDEEEDLLHTYLREKNI-PISLCYVSVID--KCLRRVFEIEEVAT 402

Query: 250 MLNKKTTECLQLKQKIDKKIAQ 315
           +L +      +   +I  K+++
Sbjct: 403 LLEQVKDLMQRHSTEIASKVSE 424


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,038,821
Number of Sequences: 53049
Number of extensions: 398075
Number of successful extensions: 828
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)