Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18e24
         (171 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P41679 Cluster: Uncharacterized 28.5 kDa protein in PK2...    87   1e-16
UniRef50_O10361 Cluster: Uncharacterized 26.5 kDa protein; n=7; ...    42   0.004
UniRef50_Q1PVF9 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  
UniRef50_UPI0000F1FCB4 Cluster: PREDICTED: similar to latent TGF...    30   8.8  
UniRef50_O21046 Cluster: Ai4; n=3; Dictyostelium discoideum|Rep:...    30   8.8  

>UniRef50_P41679 Cluster: Uncharacterized 28.5 kDa protein in
           PK2-LEF7 intergenic region; n=5;
           Nucleopolyhedrovirus|Rep: Uncharacterized 28.5 kDa
           protein in PK2-LEF7 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 247

 Score = 86.6 bits (205), Expect = 1e-16
 Identities = 41/56 (73%), Positives = 42/56 (75%)
 Frame = +1

Query: 4   LNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSXVLLNYVVFSDNXXGTXXXXXXXLI 171
           LNAPTLWT  KTTEAHEV+YEMKLF AMYFS VLLNYVVF DN  GT       LI
Sbjct: 70  LNAPTLWTMLKTTEAHEVIYEMKLFHAMYFSNVLLNYVVFLDNQMGTNFVFVNNLI 125


>UniRef50_O10361 Cluster: Uncharacterized 26.5 kDa protein; n=7;
           Nucleopolyhedrovirus|Rep: Uncharacterized 26.5 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 243

 Score = 41.5 bits (93), Expect = 0.004
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = +1

Query: 4   LNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSXVLLNY 114
           +NA TL+     TEAHE+VYE+K+  AMYF+  L+N+
Sbjct: 70  INA-TLFLRQGKTEAHEIVYELKMLHAMYFANALVNH 105


>UniRef50_Q1PVF9 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Kuenenia stuttgartiensis|Rep: Putative
           uncharacterized protein - Candidatus Kuenenia
           stuttgartiensis
          Length = 77

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 83  PCTLVXCC*IMWCFRTIXWVQ 145
           PC  + CC  +WCF+ + W++
Sbjct: 24  PCLQILCC-FIWCFKRVGWIK 43


>UniRef50_UPI0000F1FCB4 Cluster: PREDICTED: similar to latent
           TGF-beta binding protein-4; n=1; Danio rerio|Rep:
           PREDICTED: similar to latent TGF-beta binding protein-4
           - Danio rerio
          Length = 280

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +3

Query: 21  VDGVQNHRSP*SSLRNEAVPSHVL*XRAVELCGVFGQSXGYKFCF 155
           + G ++H+ P    R+EA P  ++  + +    V+ +S G+K+CF
Sbjct: 121 LSGARSHQLP--GERSEAPPPRIIQAQTIRGDSVYTESSGFKYCF 163


>UniRef50_O21046 Cluster: Ai4; n=3; Dictyostelium discoideum|Rep:
           Ai4 - Dictyostelium discoideum (Slime mold)
          Length = 217

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 159 NKNKICTXXIVRKHHIIQQHXTKVHGLEQLHFVNY 55
           NKN  CT  I RK+ +  +H   V   E+  FV Y
Sbjct: 65  NKNGYCTNNIPRKYIVKLKHNDDVKDFERYEFVTY 99


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,452,213
Number of Sequences: 1657284
Number of extensions: 2115198
Number of successful extensions: 3727
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3726
length of database: 575,637,011
effective HSP length: 36
effective length of database: 515,974,787
effective search space used: 10319495740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)