Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18e24
         (171 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   0.38 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   0.88 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   0.88 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    19   3.5  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    19   3.5  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    19   3.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    19   6.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    19   6.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    19   6.2  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    18   8.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    18   8.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    18   8.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    18   8.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    18   8.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    18   8.2  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 0.38
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 109 STARY*STWLGTASFRKLLHGLLW 38
           S  RY + W GTA+ +  + GLL+
Sbjct: 111 SCTRYWTCWNGTATEQLCIGGLLY 134


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 0.88
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 111 LCGVFGQSXGYKFCFC*QFN 170
           LCG+FG +  Y F    QFN
Sbjct: 356 LCGIFGTTTTY-FIVILQFN 374


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 0.88
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 111 LCGVFGQSXGYKFCFC*QFN 170
           LCG+FG +  Y F    QFN
Sbjct: 356 LCGIFGTTTTY-FIVILQFN 374


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
          protein 5 protein.
          Length = 144

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 12 SDFVDGVQNHRS 47
          SDFV+G   HRS
Sbjct: 17 SDFVNGKTLHRS 28


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 108 ELCGVFGQSXGYKFCFC 158
           +LCG  G++   K  FC
Sbjct: 12  KLCGKVGKNFNNKAFFC 28


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 108 ELCGVFGQSXGYKFCFC 158
           +LCG  G++   K  FC
Sbjct: 12  KLCGKVGKNFNNKAFFC 28


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 63  VNYFMGFCGFERR 25
           V  F+G C F R+
Sbjct: 535 VRAFLGLCNFYRK 547


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 44   SVVLNAVHKVGA 9
            SVV+ A +KVGA
Sbjct: 1073 SVVVQAFNKVGA 1084


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
 Frame = -1

Query: 72  LHFVNYF--MGFCGFER 28
           LHFVNY   + F  FE+
Sbjct: 213 LHFVNYIDDLFFFRFEK 229


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 114 IIQQHXTKVHG 82
           II +  TKVHG
Sbjct: 68  IIDEAATKVHG 78


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 114 IIQQHXTKVHG 82
           II +  TKVHG
Sbjct: 382 IIDEAATKVHG 392


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 114 IIQQHXTKVHG 82
           II +  TKVHG
Sbjct: 615 IIDEAATKVHG 625


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 114 IIQQHXTKVHG 82
           II +  TKVHG
Sbjct: 615 IIDEAATKVHG 625


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 32  SKPQKPMK*FTK 67
           SKP KP+K  TK
Sbjct: 112 SKPLKPVKIRTK 123


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 32  SKPQKPMK*FTK 67
           SKP KP+K  TK
Sbjct: 108 SKPLKPVKIRTK 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,301
Number of Sequences: 336
Number of extensions: 596
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 36
effective length of database: 110,489
effective search space used:  2209780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)