Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18e24
         (171 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   1.7  
AY070254-1|AAL59653.1|  225|Anopheles gambiae glutathione S-tran...    21   5.3  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    21   5.3  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    20   9.3  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 22  WTAFKTTEAHEVVYEMKLFQAMYFSXVL 105
           WT       HEVV+        YF+ +L
Sbjct: 580 WTVLTCNVPHEVVFRASRSNNFYFALLL 607


>AY070254-1|AAL59653.1|  225|Anopheles gambiae glutathione
           S-transferase E4 protein.
          Length = 225

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -3

Query: 148 NLYPXDCPKTPHNSTARY*STWLGTASFRKLLHGLLWF*TPSTKSERL 5
           +LYP D  +    + A +  + +  A FR  L  +L++    T  E++
Sbjct: 86  SLYPSDVVQRAKVNAALHFDSGVLFARFRFYLEPILYYGATETPQEKI 133


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 66  FVNYFMGFCGFERRP 22
           +VN + G  G ERRP
Sbjct: 124 YVNVWSGAWGMERRP 138


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 44  SVVLNAVHKVG 12
           SVVL AVH++G
Sbjct: 776 SVVLQAVHELG 786


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,654
Number of Sequences: 2352
Number of extensions: 2400
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 35
effective length of database: 481,659
effective search space used: 10114839
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)