Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18e24
         (171 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150202-1|AAI50203.1|  659|Homo sapiens RASGRP4 protein protein.      28   6.2  
BC146669-1|AAI46670.1|  659|Homo sapiens RASGRP4 protein protein.      28   6.2  
AY048121-1|AAK85703.1|  659|Homo sapiens RAS guanyl releasing pr...    28   6.2  
AY048119-1|AAK85701.1|  673|Homo sapiens RAS guanyl releasing pr...    28   6.2  
AK097292-1|BAC04992.1|  202|Homo sapiens protein ( Homo sapiens ...    28   6.2  
AF448437-1|AAL87858.1|  673|Homo sapiens guanyl nucleotide relea...    28   6.2  

>BC150202-1|AAI50203.1|  659|Homo sapiens RASGRP4 protein protein.
          Length = 659

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 115 HNSTARY*STWLGTASFR 62
           HN+ ARY  TW G A FR
Sbjct: 316 HNNYARYRRTWAGCAGFR 333


>BC146669-1|AAI46670.1|  659|Homo sapiens RASGRP4 protein protein.
          Length = 659

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 115 HNSTARY*STWLGTASFR 62
           HN+ ARY  TW G A FR
Sbjct: 316 HNNYARYRRTWAGCAGFR 333


>AY048121-1|AAK85703.1|  659|Homo sapiens RAS guanyl releasing
           protein 4 variant 2 protein.
          Length = 659

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 115 HNSTARY*STWLGTASFR 62
           HN+ ARY  TW G A FR
Sbjct: 316 HNNYARYRRTWAGCAGFR 333


>AY048119-1|AAK85701.1|  673|Homo sapiens RAS guanyl releasing
           protein 4 protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 115 HNSTARY*STWLGTASFR 62
           HN+ ARY  TW G A FR
Sbjct: 330 HNNYARYRRTWAGCAGFR 347


>AK097292-1|BAC04992.1|  202|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39973 fis, clone SPLEN2028365, moderately
           similar to Mus musculus ras activator RasGRP (Rasgrp)
           mRNA. ).
          Length = 202

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 115 HNSTARY*STWLGTASFR 62
           HN+ ARY  TW G A FR
Sbjct: 40  HNNYARYRRTWAGCAGFR 57


>AF448437-1|AAL87858.1|  673|Homo sapiens guanyl nucleotide
           releasing protein 4 protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 115 HNSTARY*STWLGTASFR 62
           HN+ ARY  TW G A FR
Sbjct: 330 HNNYARYRRTWAGCAGFR 347


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,442,001
Number of Sequences: 237096
Number of extensions: 334574
Number of successful extensions: 363
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 76,859,062
effective HSP length: 36
effective length of database: 68,323,606
effective search space used: 1366472120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)