Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18e22
(636 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 91 6e-19
Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical p... 78 5e-15
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 31 0.91
Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 27 8.5
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 27 8.5
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 27 8.5
AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p4... 27 8.5
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 91.1 bits (216), Expect = 6e-19
Identities = 57/144 (39%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Frame = +2
Query: 74 VGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIAS 250
V DVK+ GL N LAE+++ +G+ S D Q+F +G AP A+ P+V RWY +AS
Sbjct: 2 VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61
Query: 251 YTPAERKTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXX 424
YT AERKTW+ G++P DLFGS
Sbjct: 62 YTDAERKTWASAGGSAP------------AAAAADGDDFDLFGSDDEEEDAEKAKIVEER 109
Query: 425 LKAYADKKSKKPALIAKSSILLDV 496
L AYA+KK+KK IAKSS++LDV
Sbjct: 110 LAAYAEKKAKKAGPIAKSSVILDV 133
Score = 78.2 bits (184), Expect = 5e-15
Identities = 32/47 (68%), Positives = 40/47 (85%)
Frame = +1
Query: 496 QPWDDETDMKEMENQVRTIEMEGLLWGAXKLVPVGYGINKLQIMCVI 636
+PWDDETD+ EME VR+IEM+GL+WG KL+P+GYGI KLQI+ VI
Sbjct: 134 KPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVI 180
>Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical
protein Y41E3.10a protein.
Length = 263
Score = 78.2 bits (184), Expect = 5e-15
Identities = 32/47 (68%), Positives = 40/47 (85%)
Frame = +1
Query: 496 QPWDDETDMKEMENQVRTIEMEGLLWGAXKLVPVGYGINKLQIMCVI 636
+PWDDETD+ EME VR+IEM+GL+WG KL+P+GYGI KLQI+ VI
Sbjct: 184 KPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVI 230
Score = 34.7 bits (76), Expect = 0.056
Identities = 20/45 (44%), Positives = 23/45 (51%)
Frame = +2
Query: 362 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDV 496
DLFGS L AYA KK+ K IAKSS++LDV
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDV 183
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -2
Query: 263 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 126
QP CM + + VV+ PAP Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical protein
M01F1.7 protein.
Length = 1034
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 80 DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 259
D + G D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P
Sbjct: 866 DPRVRPGAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEP 925
Query: 260 AERKT 274
++K+
Sbjct: 926 LKQKS 930
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 80 DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 259
D + G D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P
Sbjct: 866 DPRVRPGAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEP 925
Query: 260 AERKT 274
++K+
Sbjct: 926 LKQKS 930
>Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical
protein T19C4.4 protein.
Length = 304
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -1
Query: 519 IGFIIPWLTSRRIEDLAMRAGFLDFLSAYAF 427
+ +I+P+++SR + D MR ++D +YAF
Sbjct: 137 LAYILPFMSSRVVWDYPMRVEYVDETDSYAF 167
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 263 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 126
QP CM + + VV+ PA Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 218 HVLRWYNQIASYTPAERKTWSQGTSP 295
H+L +Q+ S TPA W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 579 LQTCACWVWHK*TANYVCH 635
LQ CA W+WHK NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 579 LQTCACWVWHK*TANYVCH 635
LQ CA W+WHK NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 218 HVLRWYNQIASYTPAERKTWSQGTSP 295
H+L +Q+ S TPA W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549
>AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p450
family protein 25A5 protein.
Length = 477
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 98 GLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPA 205
G+N LNQ L + +Y +G+ +++ V GK A
Sbjct: 93 GMNQLNQSLLQNTYATGWKHTRSAVAPIFSTGKMKA 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,661,041
Number of Sequences: 27780
Number of extensions: 263162
Number of successful extensions: 760
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -