Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18e20
         (596 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D64154-1|BAA11023.1|  407|Homo sapiens Mr 110,000 antigen protein.    175   1e-43
BC017245-1|AAH17245.1|  407|Homo sapiens adhesion regulating mol...   175   1e-43
AL354836-4|CAC22308.1|  407|Homo sapiens adhesion regulating mol...   175   1e-43
BC010733-1|AAH10733.1|  296|Homo sapiens Unknown (protein for IM...    42   0.001
AF471294-1|AAQ05469.1|  118|Homo sapiens Ig heavy chain variable...    33   1.0  
AF471366-1|AAQ05541.1|  122|Homo sapiens Ig heavy chain variable...    30   5.4  
BC021711-1|AAH21711.1|  367|Homo sapiens apolipoprotein B mRNA e...    30   7.2  
AL137800-10|CAI19483.1|  367|Homo sapiens apolipoprotein B mRNA ...    30   7.2  
AK098557-1|BAC05332.1|  367|Homo sapiens protein ( Homo sapiens ...    30   7.2  
AY781884-1|AAW29186.1|  134|Homo sapiens AF1 non-allergic IgE he...    29   9.5  

>D64154-1|BAA11023.1|  407|Homo sapiens Mr 110,000 antigen protein.
          Length = 407

 Score =  175 bits (426), Expect = 1e-43
 Identities = 74/113 (65%), Positives = 90/113 (79%)
 Frame = +3

Query: 183 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 362
           NK++VEFRAG+M+LKG  V PDKRKGL+Y+ Q +DSL+HFCWKDRT+G VEDDL+IFPDD
Sbjct: 20  NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDD 79

Query: 363 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPP 521
           CEF RV +C +GRVYV            WMQEPK D+DEE+CR++NE LNNPP
Sbjct: 80  CEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPP 132


>BC017245-1|AAH17245.1|  407|Homo sapiens adhesion regulating
           molecule 1 protein.
          Length = 407

 Score =  175 bits (426), Expect = 1e-43
 Identities = 74/113 (65%), Positives = 90/113 (79%)
 Frame = +3

Query: 183 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 362
           NK++VEFRAG+M+LKG  V PDKRKGL+Y+ Q +DSL+HFCWKDRT+G VEDDL+IFPDD
Sbjct: 20  NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDD 79

Query: 363 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPP 521
           CEF RV +C +GRVYV            WMQEPK D+DEE+CR++NE LNNPP
Sbjct: 80  CEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPP 132


>AL354836-4|CAC22308.1|  407|Homo sapiens adhesion regulating
           molecule 1 protein.
          Length = 407

 Score =  175 bits (426), Expect = 1e-43
 Identities = 74/113 (65%), Positives = 90/113 (79%)
 Frame = +3

Query: 183 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 362
           NK++VEFRAG+M+LKG  V PDKRKGL+Y+ Q +DSL+HFCWKDRT+G VEDDL+IFPDD
Sbjct: 20  NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDD 79

Query: 363 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPP 521
           CEF RV +C +GRVYV            WMQEPK D+DEE+CR++NE LNNPP
Sbjct: 80  CEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPP 132


>BC010733-1|AAH10733.1|  296|Homo sapiens Unknown (protein for
           IMAGE:3897044) protein.
          Length = 296

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +3

Query: 459 PKADKDEEYCRRINEALNNPP 521
           PK D+DEE+CR++NE LNNPP
Sbjct: 1   PKTDQDEEHCRKVNEYLNNPP 21


>AF471294-1|AAQ05469.1|  118|Homo sapiens Ig heavy chain variable
           region, VH3 family protein.
          Length = 118

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
 Frame = +3

Query: 219 TLKGRM-VHPDKRKGLLYVY----QGEDSLMHFCWKDRTTGEV 332
           ++KGR  +  D  K  LY+     +GED+ +++C KDR TG++
Sbjct: 63  SMKGRFTISRDNSKNTLYLQMNSLRGEDTAVYYCAKDRATGDL 105


>AF471366-1|AAQ05541.1|  122|Homo sapiens Ig heavy chain variable
           region, VH3 family protein.
          Length = 122

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
 Frame = +3

Query: 219 TLKGRM-VHPDKRKGLLYVYQG----EDSLMHFCWKDRTTGE 329
           ++KGR  +  D  KG LY+Y      +D+ +++C KDR  G+
Sbjct: 63  SVKGRFTISRDNSKGTLYLYLNSLVDDDTAVYYCAKDRLAGD 104


>BC021711-1|AAH21711.1|  367|Homo sapiens apolipoprotein B mRNA
           editing enzyme, catalytic polypeptide-like 4 (putative)
           protein.
          Length = 367

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 249 CLDVPYDLSTSYDQHEILLCVCFLLNFPQDQTYCQTVQ*TFY 124
           C + PY + T  +    L   C +  FP   T+ QT   TFY
Sbjct: 28  CSNCPYHIRTGEEARVSLTEFCQIFGFPYGTTFPQTKHLTFY 69


>AL137800-10|CAI19483.1|  367|Homo sapiens apolipoprotein B mRNA
           editing enzyme, catalytic polypeptide-like 4 (putative)
           protein.
          Length = 367

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 249 CLDVPYDLSTSYDQHEILLCVCFLLNFPQDQTYCQTVQ*TFY 124
           C + PY + T  +    L   C +  FP   T+ QT   TFY
Sbjct: 28  CSNCPYHIRTGEEARVSLTEFCQIFGFPYGTTFPQTKHLTFY 69


>AK098557-1|BAC05332.1|  367|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25691 fis, clone TST04456. ).
          Length = 367

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 249 CLDVPYDLSTSYDQHEILLCVCFLLNFPQDQTYCQTVQ*TFY 124
           C + PY + T  +    L   C +  FP   T+ QT   TFY
Sbjct: 28  CSNCPYHIRTGEEARVSLTEFCQIFGFPYGTTFPQTKHLTFY 69


>AY781884-1|AAW29186.1|  134|Homo sapiens AF1 non-allergic IgE heavy
           chain IGHV3-30-3 protein.
          Length = 134

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = +3

Query: 219 TLKGRM-VHPDKRKGLLYVYQG----EDSLMHFCWKDRTTGEVED 338
           ++KGR  +  D  K  LY+       ED+ +++C KDRTT  + D
Sbjct: 63  SVKGRFTISRDNSKNTLYLQMTSLRIEDTAVYYCTKDRTTAALPD 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,379,788
Number of Sequences: 237096
Number of extensions: 1748972
Number of successful extensions: 2981
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2981
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)