Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18e20
         (596 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003652-1|AAO39656.1|  424|Drosophila melanogaster AT08455p pro...   176   2e-44
AY061027-1|AAL28575.1|  389|Drosophila melanogaster HL05577p pro...   176   2e-44
AE013599-1802|AAG22269.1|  389|Drosophila melanogaster CG13349-P...   176   2e-44
AE013599-1801|AAF58312.1|  389|Drosophila melanogaster CG13349-P...   176   2e-44
AY113335-1|AAM29340.1|  324|Drosophila melanogaster AT31219p pro...   107   1e-23
AE014298-706|AAF46007.1|  324|Drosophila melanogaster CG6789-PA ...   107   1e-23
AE014298-1307|AAF46467.2|  370|Drosophila melanogaster CG15370-P...    29   6.3  

>BT003652-1|AAO39656.1|  424|Drosophila melanogaster AT08455p
           protein.
          Length = 424

 Score =  176 bits (429), Expect = 2e-44
 Identities = 78/138 (56%), Positives = 99/138 (71%)
 Frame = +3

Query: 183 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 362
           + ++VEFRAGRM + G+MVHPD RKGL+Y+ Q +D LMHFCWKDRT+G+VEDDL++FPDD
Sbjct: 14  SSNLVEFRAGRMNMVGKMVHPDPRKGLVYMTQSDDGLMHFCWKDRTSGKVEDDLIVFPDD 73

Query: 363 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPPTXXXXXX 542
            E+ RV++C TGRVYV            WMQEPK DKD+E CRRINE LNNPP+      
Sbjct: 74  FEYKRVDQCKTGRVYVLKFKSSTRRMFFWMQEPKTDKDDEQCRRINELLNNPPS--AHQR 131

Query: 543 XXXXXQDREIRNLLNNMS 596
                 D +++ +LNNMS
Sbjct: 132 GGGGSNDGDLQYMLNNMS 149


>AY061027-1|AAL28575.1|  389|Drosophila melanogaster HL05577p
           protein.
          Length = 389

 Score =  176 bits (429), Expect = 2e-44
 Identities = 78/138 (56%), Positives = 99/138 (71%)
 Frame = +3

Query: 183 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 362
           + ++VEFRAGRM + G+MVHPD RKGL+Y+ Q +D LMHFCWKDRT+G+VEDDL++FPDD
Sbjct: 14  SSNLVEFRAGRMNMVGKMVHPDPRKGLVYMTQSDDGLMHFCWKDRTSGKVEDDLIVFPDD 73

Query: 363 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPPTXXXXXX 542
            E+ RV++C TGRVYV            WMQEPK DKD+E CRRINE LNNPP+      
Sbjct: 74  FEYKRVDQCKTGRVYVLKFKSSTRRMFFWMQEPKTDKDDEQCRRINELLNNPPS--AHQR 131

Query: 543 XXXXXQDREIRNLLNNMS 596
                 D +++ +LNNMS
Sbjct: 132 GGGGSNDGDLQYMLNNMS 149


>AE013599-1802|AAG22269.1|  389|Drosophila melanogaster CG13349-PB,
           isoform B protein.
          Length = 389

 Score =  176 bits (429), Expect = 2e-44
 Identities = 78/138 (56%), Positives = 99/138 (71%)
 Frame = +3

Query: 183 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 362
           + ++VEFRAGRM + G+MVHPD RKGL+Y+ Q +D LMHFCWKDRT+G+VEDDL++FPDD
Sbjct: 14  SSNLVEFRAGRMNMVGKMVHPDPRKGLVYMTQSDDGLMHFCWKDRTSGKVEDDLIVFPDD 73

Query: 363 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPPTXXXXXX 542
            E+ RV++C TGRVYV            WMQEPK DKD+E CRRINE LNNPP+      
Sbjct: 74  FEYKRVDQCKTGRVYVLKFKSSTRRMFFWMQEPKTDKDDEQCRRINELLNNPPS--AHQR 131

Query: 543 XXXXXQDREIRNLLNNMS 596
                 D +++ +LNNMS
Sbjct: 132 GGGGSNDGDLQYMLNNMS 149


>AE013599-1801|AAF58312.1|  389|Drosophila melanogaster CG13349-PA,
           isoform A protein.
          Length = 389

 Score =  176 bits (429), Expect = 2e-44
 Identities = 78/138 (56%), Positives = 99/138 (71%)
 Frame = +3

Query: 183 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 362
           + ++VEFRAGRM + G+MVHPD RKGL+Y+ Q +D LMHFCWKDRT+G+VEDDL++FPDD
Sbjct: 14  SSNLVEFRAGRMNMVGKMVHPDPRKGLVYMTQSDDGLMHFCWKDRTSGKVEDDLIVFPDD 73

Query: 363 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPPTXXXXXX 542
            E+ RV++C TGRVYV            WMQEPK DKD+E CRRINE LNNPP+      
Sbjct: 74  FEYKRVDQCKTGRVYVLKFKSSTRRMFFWMQEPKTDKDDEQCRRINELLNNPPS--AHQR 131

Query: 543 XXXXXQDREIRNLLNNMS 596
                 D +++ +LNNMS
Sbjct: 132 GGGGSNDGDLQYMLNNMS 149


>AY113335-1|AAM29340.1|  324|Drosophila melanogaster AT31219p
           protein.
          Length = 324

 Score =  107 bits (257), Expect = 1e-23
 Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
 Frame = +3

Query: 183 NKH-IVEFRAGRMTLKGRMVHPDKRKGLLYVYQG-EDSLMHFCWKDRTTGEVEDDLLIFP 356
           N H +VE++AGRM L G+MV PD RKGLL+V +  +D+ +H  W DR +G VE D++  P
Sbjct: 5   NAHNLVEYKAGRMVLLGKMVEPDDRKGLLFVRRSADDNQLHIHWMDRRSGSVELDIVATP 64

Query: 357 DDCEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEAL 509
              EF R+++C TGRVYV            WMQE +AD D  +C+R+NE +
Sbjct: 65  GVLEFRRIDQCKTGRVYVLKYTRSTQRYFFWMQELQADGDALFCQRVNELI 115


>AE014298-706|AAF46007.1|  324|Drosophila melanogaster CG6789-PA
           protein.
          Length = 324

 Score =  107 bits (257), Expect = 1e-23
 Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
 Frame = +3

Query: 183 NKH-IVEFRAGRMTLKGRMVHPDKRKGLLYVYQG-EDSLMHFCWKDRTTGEVEDDLLIFP 356
           N H +VE++AGRM L G+MV PD RKGLL+V +  +D+ +H  W DR +G VE D++  P
Sbjct: 5   NAHNLVEYKAGRMVLLGKMVEPDDRKGLLFVRRSADDNQLHIHWMDRRSGSVELDIVATP 64

Query: 357 DDCEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEAL 509
              EF R+++C TGRVYV            WMQE +AD D  +C+R+NE +
Sbjct: 65  GVLEFRRIDQCKTGRVYVLKYTRSTQRYFFWMQELQADGDALFCQRVNELI 115


>AE014298-1307|AAF46467.2|  370|Drosophila melanogaster CG15370-PA
           protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 342 SHPQPPP*FGLSNKSA*ENLLLGKHTRAPSFCLDVPYDLSTSYD 211
           SH   PP  G + +S+       K TRAP++ L+ P + S  YD
Sbjct: 240 SHAYIPPSHGQAQRSS-------KQTRAPAYTLEAPQESSFGYD 276


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,134,763
Number of Sequences: 53049
Number of extensions: 528054
Number of successful extensions: 1107
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)