Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18e14
         (502 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93426-1|AAA60225.1| 2314|Homo sapiens protein tyrosine phosphat...    33   0.74 
AC006020-1|AAF03527.1| 1648|Homo sapiens WUGSC:H_DJ1049N15.1 pro...    33   0.74 

>M93426-1|AAA60225.1| 2314|Homo sapiens protein tyrosine phosphatase
            zeta-polypeptide protein.
          Length = 2314

 Score = 32.7 bits (71), Expect = 0.74
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 83   IRISAVNPHEFGTVTKNAVVEIRSRNQRRTSARKSPAGLIDGG 211
            + I+AV+PH  G+VT   ++         + + KS AGL+ GG
Sbjct: 1374 VAITAVSPHRDGSVTSTKLLFPSKATSELSHSAKSDAGLVGGG 1416


>AC006020-1|AAF03527.1| 1648|Homo sapiens WUGSC:H_DJ1049N15.1
           protein.
          Length = 1648

 Score = 32.7 bits (71), Expect = 0.74
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 83  IRISAVNPHEFGTVTKNAVVEIRSRNQRRTSARKSPAGLIDGG 211
           + I+AV+PH  G+VT   ++         + + KS AGL+ GG
Sbjct: 707 VAITAVSPHRDGSVTSTKLLFPSKATSELSHSAKSDAGLVGGG 749


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,709,039
Number of Sequences: 237096
Number of extensions: 1125080
Number of successful extensions: 2505
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2503
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)