Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18e14
         (502 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    25   0.34 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.44 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   1.8  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   9.5  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   9.5  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    21   9.5  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 110 EFGTVTKNAVVEIRSRNQRRTSARKSPAGLIDGG 211
           EFG   KN  ++ +S  QR    R SP   I+GG
Sbjct: 93  EFGKEYKNGFIKGQSEVQRGPGGRLSPYFGINGG 126


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 334 CVPSLQRFYSRYHIPRIIENIPHSSS 411
           C+ S + +YS+++  +  + IP SSS
Sbjct: 379 CLGSTETYYSKHNTQQFTQYIPESSS 404


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 144 RSEVEINEELQRGNLLPVSSTVVPLPF 224
           RS ++INEE+QR      ++ V P PF
Sbjct: 482 RSGIDINEEIQRNREFYKNADVRP-PF 507


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 243 RIRKPSKMAAEPPSMRP 193
           R+R+ +K  AEP + RP
Sbjct: 30  RLRREAKPEAEPGNNRP 46



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 243 RIRKPSKMAAEPPSMRP 193
           R+R+ +++ AEP + RP
Sbjct: 86  RLRREAELEAEPGNNRP 102



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 243 RIRKPSKMAAEPPSMRP 193
           R+R+ +++ AEP + RP
Sbjct: 142 RLRREAELEAEPGNNRP 158


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 243 RIRKPSKMAAEPPSMRP 193
           R+R+ +K  AEP + RP
Sbjct: 31  RLRREAKPEAEPGNNRP 47


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 243 RIRKPSKMAAEPPSMRP 193
           R+R+ +K  AEP + RP
Sbjct: 2   RLRREAKPEAEPGNNRP 18



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 243 RIRKPSKMAAEPPSMRP 193
           R+R+ +K  AEP + RP
Sbjct: 142 RLRREAKPEAEPGNNRP 158


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,199
Number of Sequences: 438
Number of extensions: 2819
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)