Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18e03
         (554 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   0.55 
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   1.7  
AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        23   5.1  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        23   5.1  
EF519476-1|ABP73561.1|  165|Anopheles gambiae CTLMA2 protein.          23   8.9  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   8.9  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 26.6 bits (56), Expect = 0.55
 Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
 Frame = +1

Query: 82  LKQDAAYQ-KLQEYYNVNNTKINMLQL-FQQDRERFEKFSLCIPTPNDGDILLDYSKNRI 255
           +K   ++Q KLQ+    +  K   L+   Q+  E FE+  + I   N     L   K+  
Sbjct: 406 IKDKISHQNKLQDDLKKDIAKQGELEKKIQEHTESFEQLRVQIDEHNKNFYELKKKKDHY 465

Query: 256 NSDVFKLLLDLAKSRNVEQARDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKD-VS 432
            S    L  D+ K    E A     SG K    E+ A    ALR+   KPIL NG+D V 
Sbjct: 466 QS----LRNDIWKK---ETAVTQTLSGYK----EELARADQALRSMAGKPIL-NGRDSVR 513

Query: 433 TDVNAVLEHMKEFSD 477
             + + L+  +E++D
Sbjct: 514 KVLESFLQRGREYAD 528



 Score = 24.2 bits (50), Expect = 2.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 49  QSIVTMEPKINLKQDAAYQKLQEYYNVNNTKINML 153
           + +V     +NL + A +     YY V   KIN +
Sbjct: 113 KKVVPRSEVVNLLESAGFSNSNPYYIVKQGKINQM 147


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = +1

Query: 100  YQKLQEYYNVNNTKINMLQLFQQDRERFEKFSLCIPTPNDG--DILLDYSKNRINSDVFK 273
            Y+K  +Y+N+N+ +I+ +Q F +  E  +K  + +     G  +++  +  N +N +  +
Sbjct: 1139 YKKNTKYFNINSEQID-VQNFLEIPEDTKKLEINVGGIGFGLLEVIYQFDLNLVNFE-HR 1196

Query: 274  LLLDLAK 294
              LDL K
Sbjct: 1197 FKLDLEK 1203



 Score = 23.4 bits (48), Expect = 5.1
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +1

Query: 73   KINLKQDAAYQKLQEYYNVNNTKINMLQLFQQDRE 177
            K+ LK+ A Y  + +YYN N   +N +++++ D++
Sbjct: 1293 KVALKRPA-YVVVYDYYNTN---LNAIKVYEVDKQ 1323


>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 543 TNVDHICYSLSCIPLPLPAHYLIG 472
           T V H+     C+P P+P+   IG
Sbjct: 42  TPVIHVLQYPGCVPKPIPSFACIG 65


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 543 TNVDHICYSLSCIPLPLPAHYLIG 472
           T V H+     C+P P+P+   IG
Sbjct: 42  TPVIHVLQYPGCVPKPIPSFACIG 65


>EF519476-1|ABP73561.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 468 ILRSSSERAMEGVYRKGYNRCDQHWYW 548
           +L     RAM  V  +G +  D  +YW
Sbjct: 64  VLNEDEARAMGEVIAEGESDSDDEFYW 90


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = +1

Query: 211 PNDGDILLDYSKNRINSDVFKLLLDLAKSRNVEQARDAMFSGQKINFTED 360
           P+  ++ +   +  I+++  +L +DL  S N E+ +  M   +  NF  D
Sbjct: 437 PSITNVTVRIEEKLISNEAVELDIDLRTSCNCEKNKKPMELSELCNFNGD 486


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,762
Number of Sequences: 2352
Number of extensions: 10949
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)