Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18e03
(554 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical ... 207 4e-54
AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical ... 206 8e-54
Z83125-8|CAB05623.1| 507|Caenorhabditis elegans Hypothetical pr... 33 0.18
L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.18
AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical... 30 1.3
Z81527-12|CAB04277.2| 487|Caenorhabditis elegans Hypothetical p... 29 1.7
Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 28 3.9
AF068716-3|ABQ13069.1| 208|Caenorhabditis elegans Hypothetical ... 28 5.2
AF025459-4|AAB70984.2| 292|Caenorhabditis elegans Hypothetical ... 27 6.9
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 27 6.9
Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z83239-7|CAB05806.2| 345|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z68105-6|CAA92119.4| 1340|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z68010-4|CAJ76939.1| 1340|Caenorhabditis elegans Hypothetical pr... 27 9.1
U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exosto... 27 9.1
U34902-1|AAA97607.1| 393|Caenorhabditis elegans sma-3 protein. 27 9.1
U00046-9|AAC47050.2| 393|Caenorhabditis elegans Small protein 3... 27 9.1
AY436362-1|AAR30497.1| 1293|Caenorhabditis elegans RhoGEF protein. 27 9.1
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 27 9.1
AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfa... 27 9.1
>AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical
protein Y87G2A.8b protein.
Length = 586
Score = 207 bits (506), Expect = 4e-54
Identities = 96/162 (59%), Positives = 124/162 (76%)
Frame = +1
Query: 67 EPKINLKQDAAYQKLQEYYNVNNTKINMLQLFQQDRERFEKFSLCIPTPNDGDILLDYSK 246
E ++L QDA + +L+ + N +L+LF++D RFEKF+ TP DGD L D+SK
Sbjct: 33 EKAMSLSQDATFVELKRHVEANEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSK 91
Query: 247 NRINSDVFKLLLDLAKSRNVEQARDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKD 426
NRI + F+LL+ LAKSR VE++R+AMFS +KINFTE+RAVLH+ALRNR N+PILV+GKD
Sbjct: 92 NRITDESFQLLMRLAKSRGVEESRNAMFSAEKINFTENRAVLHVALRNRANRPILVDGKD 151
Query: 427 VSTDVNAVLEHMKEFSDQVVSGQWKGYTGKAITDVINIGIGG 552
V DVN VL HMKEF ++++SG W GYTGK ITDV+NIGIGG
Sbjct: 152 VMPDVNRVLAHMKEFCNEIISGSWTGYTGKKITDVVNIGIGG 193
>AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical
protein Y87G2A.8a protein.
Length = 551
Score = 206 bits (503), Expect = 8e-54
Identities = 95/159 (59%), Positives = 123/159 (77%)
Frame = +1
Query: 76 INLKQDAAYQKLQEYYNVNNTKINMLQLFQQDRERFEKFSLCIPTPNDGDILLDYSKNRI 255
++L QDA + +L+ + N +L+LF++D RFEKF+ TP DGD L D+SKNRI
Sbjct: 1 MSLSQDATFVELKRHVEANEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSKNRI 59
Query: 256 NSDVFKLLLDLAKSRNVEQARDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVST 435
+ F+LL+ LAKSR VE++R+AMFS +KINFTE+RAVLH+ALRNR N+PILV+GKDV
Sbjct: 60 TDESFQLLMRLAKSRGVEESRNAMFSAEKINFTENRAVLHVALRNRANRPILVDGKDVMP 119
Query: 436 DVNAVLEHMKEFSDQVVSGQWKGYTGKAITDVINIGIGG 552
DVN VL HMKEF ++++SG W GYTGK ITDV+NIGIGG
Sbjct: 120 DVNRVLAHMKEFCNEIISGSWTGYTGKKITDVVNIGIGG 158
>Z83125-8|CAB05623.1| 507|Caenorhabditis elegans Hypothetical
protein T15D6.10 protein.
Length = 507
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 471 EFLHVF*YRIDISADILTVHQDRLVLTVTQSYMQYCPVFCEVY 343
E H F Y SA H+D++V+T+T M + ++C Y
Sbjct: 113 EHFHPFLYHTKPSAMSAFAHKDQIVVTLTSENMMHATMYCRYY 155
>L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical
protein F44E2.10 protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +1
Query: 121 YNVNNTKINMLQLFQQDRERFEKFSLCIPTPNDGD--ILLDYSK 246
Y+ NN +++ ++++Q +R E FS +P DG+ I+L +S+
Sbjct: 79 YSFNNAEVDDMEIYQTERWSKESFSYDVPISEDGEYVIILKFSE 122
>AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical
protein Y46G5A.29 protein.
Length = 770
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 7/125 (5%)
Frame = +1
Query: 22 RHSICKAPVQSIVTMEPKI---NLKQDAAYQKLQEYYNVNNTKINMLQLFQQDRERFEKF 192
RH+ K P Q T P I NL++D + ++ + LF++ RE K
Sbjct: 185 RHAFLKGPYQKYSTQNPNIFIYNLEKDIEQRTSEKVVTSEPVLPSQHPLFEEQRE-ILKA 243
Query: 193 SLCIPTPNDGDILLDYSKNRINSDVFKL----LLDLAKSRNVEQARDAMFSGQKINFTED 360
+ P P L + S+N + DVF A + ++ +M G K T
Sbjct: 244 KMVTPLPVTVASLAETSEN--SDDVFDFDGLTFESPATANKIQVTAASMMMGDKAGSTRA 301
Query: 361 RAVLH 375
+ H
Sbjct: 302 PEISH 306
>Z81527-12|CAB04277.2| 487|Caenorhabditis elegans Hypothetical
protein F35E12.10 protein.
Length = 487
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 190 TFRNAPDLVGKVGAY*FLCCLHCNILVISDM 98
T+ N DL G VG Y FL CL CN +++
Sbjct: 261 TYGNMGDLSGNVGGYTFL-CLDCNQFYFTEL 290
>Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical
protein F31B12.3 protein.
Length = 383
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 316 RDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSG 492
R+ MFS IN+ D+ + ++ + K I++ + T++N + + +F DQV+SG
Sbjct: 113 RNVMFS---INYLIDQKLFDKVVKPKTGKNIVIYKVKLLTNLNLSNKILFQFQDQVISG 168
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 260 VMFLSCSSISLRAEMLNKPEMPCSQV 337
V F SC+S+ E+LN ++PC +
Sbjct: 319 VFFSSCNSVKFHHELLNYIDIPCMSI 344
>AF068716-3|ABQ13069.1| 208|Caenorhabditis elegans Hypothetical
protein F26D11.13 protein.
Length = 208
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/78 (21%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 274 LLLDLAKSRNVEQARDAMFSGQKINF-TEDRAVLHIALRNRQNKPILVNGKDVSTDVNAV 450
L +D K +E ++ + + + + T+D+ +LH + ++R + L++ K ++ + V
Sbjct: 8 LEIDREKEETIEIQKNLVLNNMILKYKTDDQIILHSSEKDRAQRQCLLDVKSLTENGMKV 67
Query: 451 LEHMKEFSDQVVSGQWKG 504
+ + + D SG KG
Sbjct: 68 INSIGKLRD-AASGIRKG 84
>AF025459-4|AAB70984.2| 292|Caenorhabditis elegans Hypothetical
protein H14A12.3 protein.
Length = 292
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 388 NRQNKPILVNGKDVSTDVNAVLEHMK 465
N+ N+ + + KDV T + + LEH+K
Sbjct: 31 NKTNENLWIQRKDVDTTLRSALEHLK 56
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 409 LVNGKDVSTDVNAVLEHMKEFSDQVVSGQWK 501
+V D DV+ +E KEF D+ V +W+
Sbjct: 1227 IVKNDDEQDDVSERIERFKEFLDEEVQTEWE 1257
>Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical
protein K01G5.6 protein.
Length = 814
Score = 27.1 bits (57), Expect = 9.1
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Frame = +1
Query: 91 DAAYQKLQEYYNVNNTKINM-LQLFQQDRERFEKFSLCIPTPNDGDILLDYSKNRINSDV 267
+AA ++L+E N K+ + Q RE + + +PN D ++DYS+ I+S
Sbjct: 123 EAAQRQLEELRETQNVKVFLPFSPLQIPRELEQPSQI---SPNQLDDIIDYSRCSISS-F 178
Query: 268 FKLLLDLAKSRNVEQARDAMFSGQKINFTE--DRAVLHIALRN 390
+ +D+ S E+ +F N E D+A + I + N
Sbjct: 179 MPVYVDIITSGQSEKEWLNVFQEVIPNLVETPDKACIKIHISN 221
>Z83239-7|CAB05806.2| 345|Caenorhabditis elegans Hypothetical
protein T09F5.5 protein.
Length = 345
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +1
Query: 328 FSGQKINFTEDRAVLHIALRNRQNKPILVNGK--DVSTDVNAVLEHMKEFSDQVVSGQWK 501
F ++ F D+ L L Q + G +ST + V H + S + QW+
Sbjct: 188 FFDPRLFFVTDKTTLMTMLMGLQTLTLAPQGTFYTLSTWYHLVYSHSSQVSPETRKMQWR 247
Query: 502 GYTGKAITDVINIGI 546
+ ++ +I IG+
Sbjct: 248 FFMSSSVQIMIPIGV 262
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 27.1 bits (57), Expect = 9.1
Identities = 25/109 (22%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = +1
Query: 229 LLDYSKNRINSDVFKLLLDLAKSRNVEQARDAMFSGQ-KINFTEDRAVLHIALRNRQNKP 405
LL+YSK+ ++ K + K ++++ D +G+ K+N+T+D+ H A+ +
Sbjct: 93 LLNYSKHY---ELEKHIKFNHKVNSIDRNEDYEKTGKWKVNYTDDKGATHDAV---FDGV 146
Query: 406 ILVNGKDVSTDVNAVLEHMKEFSDQVV-SGQWKGYTGKAITDVINIGIG 549
+L +G + + +F +++ S +K + G V+ +GIG
Sbjct: 147 MLCSGHHTTPNWPQKFRGQDDFKGRIIHSHSYKDHRGYEDKVVVVVGIG 195
>Z68105-6|CAA92119.4| 1340|Caenorhabditis elegans Hypothetical
protein F13E6.6 protein.
Length = 1340
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 298 RNVEQARDAMFSGQKINFTEDRAV-LHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFS 474
RNVE R++ +G+KI+ R V L L+ + + I+ + + T++N ++ +E +
Sbjct: 178 RNVEGLRESSQNGEKIDRALKRIVSLQSQLKQLKPESIISDSQKSLTNLNMDIDSDEEEN 237
Query: 475 DQVVSGQWKG 504
D V + +G
Sbjct: 238 DVVYLPESQG 247
>Z68010-4|CAJ76939.1| 1340|Caenorhabditis elegans Hypothetical
protein F13E6.6 protein.
Length = 1340
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 298 RNVEQARDAMFSGQKINFTEDRAV-LHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFS 474
RNVE R++ +G+KI+ R V L L+ + + I+ + + T++N ++ +E +
Sbjct: 178 RNVEGLRESSQNGEKIDRALKRIVSLQSQLKQLKPESIISDSQKSLTNLNMDIDSDEEEN 237
Query: 475 DQVVSGQWKG 504
D V + +G
Sbjct: 238 DVVYLPESQG 247
>U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exostoses
homolog 2 protein.
Length = 814
Score = 27.1 bits (57), Expect = 9.1
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Frame = +1
Query: 91 DAAYQKLQEYYNVNNTKINM-LQLFQQDRERFEKFSLCIPTPNDGDILLDYSKNRINSDV 267
+AA ++L+E N K+ + Q RE + + +PN D ++DYS+ I+S
Sbjct: 123 EAAQRQLEELRETQNVKVFLPFSPLQIPRELEQPSQI---SPNQLDDIIDYSRCSISS-F 178
Query: 268 FKLLLDLAKSRNVEQARDAMFSGQKINFTE--DRAVLHIALRN 390
+ +D+ S E+ +F N E D+A + I + N
Sbjct: 179 MPVYVDIITSGQSEKEWLNVFQEVIPNLVETPDKACIKIHISN 221
>U34902-1|AAA97607.1| 393|Caenorhabditis elegans sma-3 protein.
Length = 393
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +1
Query: 277 LLDLAKSRNVEQARDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVL 453
L ++ ++ +E R + G +++ ED+ +HI + N + P+ V K+ + +N L
Sbjct: 240 LTNVNRNGTIENTRMHIGKGIQLDNKEDQ--MHIMITNNSDMPVFVQSKNTNLMMNMPL 296
>U00046-9|AAC47050.2| 393|Caenorhabditis elegans Small protein 3
protein.
Length = 393
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +1
Query: 277 LLDLAKSRNVEQARDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVL 453
L ++ ++ +E R + G +++ ED+ +HI + N + P+ V K+ + +N L
Sbjct: 240 LTNVNRNGTIENTRMHIGKGIQLDNKEDQ--MHIMITNNSDMPVFVQSKNTNLMMNMPL 296
>AY436362-1|AAR30497.1| 1293|Caenorhabditis elegans RhoGEF protein.
Length = 1293
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 298 RNVEQARDAMFSGQKINFTEDRAV-LHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFS 474
RNVE R++ +G+KI+ R V L L+ + + I+ + + T++N ++ +E +
Sbjct: 131 RNVEGLRESSQNGEKIDRALKRIVSLQSQLKQLKPESIISDSQKSLTNLNMDIDSDEEEN 190
Query: 475 DQVVSGQWKG 504
D V + +G
Sbjct: 191 DVVYLPESQG 200
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 27.1 bits (57), Expect = 9.1
Identities = 25/109 (22%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = +1
Query: 229 LLDYSKNRINSDVFKLLLDLAKSRNVEQARDAMFSGQ-KINFTEDRAVLHIALRNRQNKP 405
LL+YSK+ ++ K + K ++++ D +G+ K+N+T+D+ H A+ +
Sbjct: 93 LLNYSKHY---ELEKHIKFNHKVNSIDRNEDYEKTGKWKVNYTDDKGATHDAV---FDGV 146
Query: 406 ILVNGKDVSTDVNAVLEHMKEFSDQVV-SGQWKGYTGKAITDVINIGIG 549
+L +G + + +F +++ S +K + G V+ +GIG
Sbjct: 147 MLCSGHHTTPNWPQKFRGQDDFKGRIIHSHSYKDHRGYEDKVVVVVGIG 195
>AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfate
GlcNAc transferase-I/II protein.
Length = 814
Score = 27.1 bits (57), Expect = 9.1
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Frame = +1
Query: 91 DAAYQKLQEYYNVNNTKINM-LQLFQQDRERFEKFSLCIPTPNDGDILLDYSKNRINSDV 267
+AA ++L+E N K+ + Q RE + + +PN D ++DYS+ I+S
Sbjct: 123 EAAQRQLEELRETQNVKVFLPFSPLQIPRELEQPSQI---SPNQLDDIIDYSRCSISS-F 178
Query: 268 FKLLLDLAKSRNVEQARDAMFSGQKINFTE--DRAVLHIALRN 390
+ +D+ S E+ +F N E D+A + I + N
Sbjct: 179 MPVYVDIITSGQSEKEWLNVFQEVIPNLVETPDKACIKIHISN 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,519,998
Number of Sequences: 27780
Number of extensions: 254414
Number of successful extensions: 741
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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