Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18d24
(481 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5K441 Cluster: Putative uncharacterized protein; n=2; ... 36 0.62
UniRef50_Q8I5U4 Cluster: Putative uncharacterized protein; n=1; ... 34 1.9
UniRef50_Q057H2 Cluster: 5'-3' exonuclease domain of DNA polymer... 33 3.3
UniRef50_A0E6V7 Cluster: Chromosome undetermined scaffold_80, wh... 33 3.3
UniRef50_Q3LWA1 Cluster: DNA-directed RNA polymerase I 40kDa sub... 32 5.8
UniRef50_A0CT90 Cluster: Chromosome undetermined scaffold_27, wh... 32 5.8
UniRef50_UPI00006CBD50 Cluster: hypothetical protein TTHERM_0015... 32 7.7
UniRef50_Q4UEZ0 Cluster: Sodium/hydrogen exchanger, putative; n=... 32 7.7
>UniRef50_A5K441 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 5540
Score = 35.5 bits (78), Expect = 0.62
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 241 GNHLIPDCLTDREHVYSSKQ*NIYIMTMLYYKNNLWLFYAVKKVTINKKSNEYKLQNVHQ 420
G+ LI DCL + YS K + YYK + F +K IN+KS Y ++ +Q
Sbjct: 3140 GSKLITDCLCSAGYEYSEKTASCEQCKPGYYKKSTGNFICIKGCPINRKSTIYGAKSYNQ 3199
>UniRef50_Q8I5U4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 438
Score = 33.9 bits (74), Expect = 1.9
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 364 KKVTINKKSNEYKLQNV--HQYESIIKLKIQFHYNVVFKKK 480
KK+ I KK N +K + HQY IK+K ++Y + +KKK
Sbjct: 261 KKINILKKKNFFKHSKLYRHQYYFNIKMKTIYNYIIAYKKK 301
>UniRef50_Q057H2 Cluster: 5'-3' exonuclease domain of DNA polymerase
I; n=2; cellular organisms|Rep: 5'-3' exonuclease domain
of DNA polymerase I - Buchnera aphidicola subsp. Cinara
cedri
Length = 886
Score = 33.1 bits (72), Expect = 3.3
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 310 YIMTMLYYKNNLW--LFYAVKKVTINKKSNEYKLQNVHQYESIIKLKIQFHYNVVFKKK 480
Y + Y KN + L Y KK NKK +K + + ES+I LKI F + KKK
Sbjct: 421 YYYKLNYKKNKKYQNLIYKYKK---NKKEKSFKRKFIIMQESLISLKIYFLFKKNIKKK 476
>UniRef50_A0E6V7 Cluster: Chromosome undetermined scaffold_80, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_80,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 33.1 bits (72), Expect = 3.3
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 274 REHVYSSKQ*NIYIMTMLYYK---NNLWLFYAVKKVTINKKSNEYKLQN 411
++ YS+ I+I+ Y K N + +FY KK NKK+N KLQN
Sbjct: 104 KDQDYSTFNEYIHILKQFYSKEKYNYICIFYIYKKRIKNKKTNSIKLQN 152
>UniRef50_Q3LWA1 Cluster: DNA-directed RNA polymerase I 40kDa
subunit; n=1; Bigelowiella natans|Rep: DNA-directed RNA
polymerase I 40kDa subunit - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 293
Score = 32.3 bits (70), Expect = 5.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 307 IYIMTMLYYKNNLWLFYAVKKVTINKKSNEY 399
I I ++YYK NL F +KK INKK +++
Sbjct: 218 ILIKNLIYYKQNLENFLYLKKTNINKKFSKF 248
>UniRef50_A0CT90 Cluster: Chromosome undetermined scaffold_27, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_27,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 541
Score = 32.3 bits (70), Expect = 5.8
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 325 LYYKNNLWLFYAVKKVTINKKSNEYKL-QNVHQYESIIKLKIQFHYNVV 468
+YY+N L +A +++ INKK +Y QNV Q ESI KL+I N +
Sbjct: 299 IYYEN---LLHASRRI-INKKELKYAYTQNVQQIESIYKLQIVHKENQI 343
>UniRef50_UPI00006CBD50 Cluster: hypothetical protein
TTHERM_00151690; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00151690 - Tetrahymena
thermophila SB210
Length = 823
Score = 31.9 bits (69), Expect = 7.7
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 337 NNLWLFYAVKKVTINKKSNEYKLQNVHQYESIIKLKIQFHYN 462
NN+ +K+V+++K + + KLQN H + IQF+ N
Sbjct: 469 NNIQKSKQIKRVSVSKSNKKNKLQNQHDENHVSITSIQFYDN 510
>UniRef50_Q4UEZ0 Cluster: Sodium/hydrogen exchanger, putative; n=3;
Theileria|Rep: Sodium/hydrogen exchanger, putative -
Theileria annulata
Length = 925
Score = 31.9 bits (69), Expect = 7.7
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 328 YYKNNLWLFYAVKKVTINKKSNEYKLQNVHQYESIIKLKI-QFHYNVVFKK 477
YY N + L KK +N +EYK+ N Y IIK I +F+ + F+K
Sbjct: 868 YYSNGMLLDEDEKK--LNDLLDEYKISNKSNYTKIIKFIIKKFYQMITFRK 916
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,034,458
Number of Sequences: 1657284
Number of extensions: 8770971
Number of successful extensions: 18318
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18306
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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