Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18d24
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.36 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   3.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   3.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.36
 Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -2

Query: 480 FFFKNYIVVKLNF*FNYTFIL--MHVL*FILIAFFIYCNFF 364
           +F+  +I++   + F Y FI+  +H+L  + I +F+   FF
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFF 142


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 141 RFEGWGSRCNYTETLELISQGGW 209
           ++ G      Y E +EL  +GGW
Sbjct: 289 KYTGEAGMLGYNEIVELQKEGGW 311


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/23 (26%), Positives = 17/23 (73%)
 Frame = +1

Query: 412 VHQYESIIKLKIQFHYNVVFKKK 480
           + +Y S++ + + + +N++F+KK
Sbjct: 73  LQRYCSVLLVFLTYFFNILFRKK 95


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/23 (26%), Positives = 17/23 (73%)
 Frame = +1

Query: 412 VHQYESIIKLKIQFHYNVVFKKK 480
           + +Y S++ + + + +N++F+KK
Sbjct: 69  LQRYCSVLLVFLTYFFNILFRKK 91


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 135 AFRFEGWGSRCNYTETLELISQGGW 209
           A R+ G      Y E +E  + GGW
Sbjct: 291 AGRYTGERGMMGYNEIVEAQNAGGW 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,125
Number of Sequences: 336
Number of extensions: 2507
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)