Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18d21
(665 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB002333-1|BAA20793.2| 1484|Homo sapiens KIAA0335 protein. 34 0.52
Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein. 33 0.69
X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein. 33 0.69
X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein. 33 0.69
S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain pro... 33 0.69
BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein. 33 0.69
AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein. 33 0.69
AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein p... 33 0.69
BC069240-1|AAH69240.1| 494|Homo sapiens TMEM87A protein protein. 32 2.1
BC005335-1|AAH05335.1| 181|Homo sapiens TMEM87A protein protein. 32 2.1
AK075403-1|BAC11598.1| 564|Homo sapiens protein ( Homo sapiens ... 32 2.1
AK074870-1|BAC11256.1| 555|Homo sapiens protein ( Homo sapiens ... 32 2.1
BC019095-1|AAH19095.1| 259|Homo sapiens prune homolog 2 (Drosop... 31 3.7
AL390239-3|CAO03468.1| 803|Homo sapiens prune homolog 2 (Drosop... 31 3.7
AL390239-2|CAI16085.1| 259|Homo sapiens prune homolog 2 (Drosop... 31 3.7
AL390239-1|CAI16084.1| 298|Homo sapiens prune homolog 2 (Drosop... 31 3.7
BC150191-1|AAI50192.1| 431|Homo sapiens keratin 40 protein. 31 4.9
BC150174-1|AAI50175.1| 431|Homo sapiens keratin 40 protein. 31 4.9
BC130396-1|AAI30397.1| 431|Homo sapiens keratin 40 protein. 31 4.9
AF272390-1|AAF78783.1| 1742|Homo sapiens myosin 5c protein. 31 4.9
U57592-1|AAC50822.1| 1266|Homo sapiens jumonji putative protein ... 30 6.5
AF161352-1|AAF28912.1| 290|Homo sapiens HSPC089 protein. 30 6.5
BC038118-1|AAH38118.1| 647|Homo sapiens TMC5 protein protein. 30 8.5
BC027602-1|AAH27602.1| 760|Homo sapiens transmembrane channel-l... 30 8.5
AY358155-1|AAQ88522.1| 948|Homo sapiens SAYY8238 protein. 30 8.5
AY263164-1|AAP78779.1| 760|Homo sapiens TMC5 protein protein. 30 8.5
AY236494-1|AAP69872.1| 760|Homo sapiens transmembrane channel-l... 30 8.5
AL357148-2|CAI16568.1| 1460|Homo sapiens ankyrin repeat domain 3... 30 8.5
AL357148-1|CAI16567.1| 1341|Homo sapiens breast cancer antigen N... 30 8.5
AL157387-4|CAH71319.1| 1460|Homo sapiens ankyrin repeat domain 3... 30 8.5
AL157387-3|CAH71320.1| 1341|Homo sapiens breast cancer antigen N... 30 8.5
AJ786658-1|CAH10353.1| 431|Homo sapiens Ka36 protein protein. 30 8.5
AF269087-1|AAK27325.1| 1341|Homo sapiens breast cancer antigen N... 30 8.5
>AB002333-1|BAA20793.2| 1484|Homo sapiens KIAA0335 protein.
Length = 1484
Score = 33.9 bits (74), Expect = 0.52
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 262 EEHNAEEENYKMYMDSLQKH-QLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPR 438
+EH +EE++ +++ ++ K + ESE T +S Q ++A + +SG + L P
Sbjct: 367 QEHLSEEKDERLHCENNDKAPESESEKPTPLSTGQGNRAEEGPNASSGFMKT--AVLGPT 424
Query: 439 QMSTLMLKTNHLSRSLNFNET 501
+ +M+K N L+ S N+N T
Sbjct: 425 -LKNVMMKNNKLAVSPNYNAT 444
>Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 33.5 bits (73), Expect = 0.69
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +1
Query: 205 RQLSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQLHQAMQ 381
R++ NAE +K + E E+EN L QK +++ H +EQ H
Sbjct: 335 RKIQINNAENTMK-SLLSDVEELVEKENQASRKGQLVQKESMDTINHASQLVEQAHDMRD 393
Query: 382 S--SLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFNETIHPQRDEID 528
+NN + + + LSP+++S ++ + + + QR+ +D
Sbjct: 394 KIQEINNKMLYYGEEHELSPKEISEKLVLAQKMLEEIRSRQPFFTQRELVD 444
>X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein.
Length = 1816
Score = 33.5 bits (73), Expect = 0.69
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +1
Query: 205 RQLSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQLHQAMQ 381
R++ NAE +K + E E+EN L QK +++ H +EQ H
Sbjct: 328 RKIQINNAENTMK-SLLSDVEELVEKENQASRKGQLVQKESMDTINHASQLVEQAHDMRD 386
Query: 382 S--SLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFNETIHPQRDEID 528
+NN + + + LSP+++S ++ + + + QR+ +D
Sbjct: 387 KIQEINNKMLYYGEEHELSPKEISEKLVLAQKMLEEIRSRQPFFTQRELVD 437
>X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein.
Length = 1581
Score = 33.5 bits (73), Expect = 0.69
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +1
Query: 205 RQLSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQLHQAMQ 381
R++ NAE +K + E E+EN L QK +++ H +EQ H
Sbjct: 93 RKIQINNAENTMK-SLLSDVEELVEKENQASRKGQLVQKESMDTINHASQLVEQAHDMRD 151
Query: 382 S--SLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFNETIHPQRDEID 528
+NN + + + LSP+++S ++ + + + QR+ +D
Sbjct: 152 KIQEINNKMLYYGEEHELSPKEISEKLVLAQKMLEEIRSRQPFFTQRELVD 202
>S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain
protein.
Length = 1816
Score = 33.5 bits (73), Expect = 0.69
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +1
Query: 205 RQLSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQLHQAMQ 381
R++ NAE +K + E E+EN L QK +++ H +EQ H
Sbjct: 328 RKIQINNAENTMK-SLLSDVEELVEKENQASRKGQLVQKESMDTINHASQLVEQAHDMRD 386
Query: 382 S--SLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFNETIHPQRDEID 528
+NN + + + LSP+++S ++ + + + QR+ +D
Sbjct: 387 KIQEINNKMLYYGEEHELSPKEISEKLVLAQKMLEEIRSRQPFFTQRELVD 437
>BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein.
Length = 1816
Score = 33.5 bits (73), Expect = 0.69
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +1
Query: 205 RQLSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQLHQAMQ 381
R++ NAE +K + E E+EN L QK +++ H +EQ H
Sbjct: 328 RKIQINNAENTMK-SLLSDVEELVEKENQASRKGQLVQKESMDTINHASQLVEQAHDMRD 386
Query: 382 S--SLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFNETIHPQRDEID 528
+NN + + + LSP+++S ++ + + + QR+ +D
Sbjct: 387 KIQEINNKMLYYGEEHELSPKEISEKLVLAQKMLEEIRSRQPFFTQRELVD 437
>AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 33.5 bits (73), Expect = 0.69
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +1
Query: 205 RQLSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQLHQAMQ 381
R++ NAE +K + E E+EN L QK +++ H +EQ H
Sbjct: 335 RKIQINNAENTMK-SLLSDVEELVEKENQASRKGQLVQKESMDTINHASQLVEQAHDMRD 393
Query: 382 S--SLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFNETIHPQRDEID 528
+NN + + + LSP+++S ++ + + + QR+ +D
Sbjct: 394 KIQEINNKMLYYGEEHELSPKEISEKLVLAQKMLEEIRSRQPFFTQRELVD 444
>AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein
protein.
Length = 1852
Score = 33.5 bits (73), Expect = 0.69
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +1
Query: 205 RQLSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQLHQAMQ 381
R++ NAE +K + E E+EN L QK +++ H +EQ H
Sbjct: 364 RKIQINNAENTMK-SLLSDVEELVEKENQASRKGQLVQKESMDTINHASQLVEQAHDMRD 422
Query: 382 S--SLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFNETIHPQRDEID 528
+NN + + + LSP+++S ++ + + + QR+ +D
Sbjct: 423 KIQEINNKMLYYGEEHELSPKEISEKLVLAQKMLEEIRSRQPFFTQRELVD 473
>BC069240-1|AAH69240.1| 494|Homo sapiens TMEM87A protein protein.
Length = 494
Score = 31.9 bits (69), Expect = 2.1
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 217 SLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQ 363
SLN W+LK E +N + E ++Y++ L +K L +Y T + Q
Sbjct: 16 SLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQ 65
>BC005335-1|AAH05335.1| 181|Homo sapiens TMEM87A protein protein.
Length = 181
Score = 31.9 bits (69), Expect = 2.1
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 217 SLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQ 363
SLN W+LK E +N + E ++Y++ L +K L +Y T + Q
Sbjct: 77 SLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQ 126
>AK075403-1|BAC11598.1| 564|Homo sapiens protein ( Homo sapiens
cDNA PSEC0094 fis, clone NT2RP2001499, weakly similar to
PROTEIN PTM1 PRECURSOR. ).
Length = 564
Score = 31.9 bits (69), Expect = 2.1
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 217 SLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQ 363
SLN W+LK E +N + E ++Y++ L +K L +Y T + Q
Sbjct: 86 SLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQ 135
>AK074870-1|BAC11256.1| 555|Homo sapiens protein ( Homo sapiens
cDNA FLJ90389 fis, clone NT2RP2005463, weakly similar to
PROTEIN PTM1 PRECURSOR. ).
Length = 555
Score = 31.9 bits (69), Expect = 2.1
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 217 SLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQ 363
SLN W+LK E +N + E ++Y++ L +K L +Y T + Q
Sbjct: 77 SLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQ 126
>BC019095-1|AAH19095.1| 259|Homo sapiens prune homolog 2
(Drosophila) protein.
Length = 259
Score = 31.1 bits (67), Expect = 3.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 433 PRQMSTLMLKTNHLSRSLNFNETIHPQRDEIDLHQ 537
PR +T + LN +E+ H RDEI+LHQ
Sbjct: 62 PRTEFNYFTETRFILEELNISESFHIFRDEINLHQ 96
>AL390239-3|CAO03468.1| 803|Homo sapiens prune homolog 2
(Drosophila) protein.
Length = 803
Score = 31.1 bits (67), Expect = 3.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 433 PRQMSTLMLKTNHLSRSLNFNETIHPQRDEIDLHQ 537
PR +T + LN +E+ H RDEI+LHQ
Sbjct: 62 PRTEFNYFTETRFILEELNISESFHIFRDEINLHQ 96
>AL390239-2|CAI16085.1| 259|Homo sapiens prune homolog 2
(Drosophila) protein.
Length = 259
Score = 31.1 bits (67), Expect = 3.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 433 PRQMSTLMLKTNHLSRSLNFNETIHPQRDEIDLHQ 537
PR +T + LN +E+ H RDEI+LHQ
Sbjct: 62 PRTEFNYFTETRFILEELNISESFHIFRDEINLHQ 96
>AL390239-1|CAI16084.1| 298|Homo sapiens prune homolog 2
(Drosophila) protein.
Length = 298
Score = 31.1 bits (67), Expect = 3.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 433 PRQMSTLMLKTNHLSRSLNFNETIHPQRDEIDLHQ 537
PR +T + LN +E+ H RDEI+LHQ
Sbjct: 62 PRTEFNYFTETRFILEELNISESFHIFRDEINLHQ 96
>BC150191-1|AAI50192.1| 431|Homo sapiens keratin 40 protein.
Length = 431
Score = 30.7 bits (66), Expect = 4.9
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Frame = +1
Query: 274 AEEENYKMYMDS--LQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPRQMS 447
AE + +D+ L +S+Y +++S+ QL +A SSL+ GI+ L S +
Sbjct: 155 AENSRLAVQLDNCKLATDDFKSKYESELSLRQLLEADISSLH--GILEELTLCKSDLEAH 212
Query: 448 TLMLKTNHLSRSLNFNETIHPQRDEIDLHQNLRHEEALRNLDVTLFRNELELQ 606
LK + L N E ++ R+++ ++ + A LD+ +E+ Q
Sbjct: 213 VESLKEDLLCLKKNHEEEVNLLREQLGDRLSVELDTA-PTLDLNRVLDEMRCQ 264
>BC150174-1|AAI50175.1| 431|Homo sapiens keratin 40 protein.
Length = 431
Score = 30.7 bits (66), Expect = 4.9
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Frame = +1
Query: 274 AEEENYKMYMDS--LQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPRQMS 447
AE + +D+ L +S+Y +++S+ QL +A SSL+ GI+ L S +
Sbjct: 155 AENSRLAVQLDNCKLATDDFKSKYESELSLRQLLEADISSLH--GILEELTLCKSDLEAH 212
Query: 448 TLMLKTNHLSRSLNFNETIHPQRDEIDLHQNLRHEEALRNLDVTLFRNELELQ 606
LK + L N E ++ R+++ ++ + A LD+ +E+ Q
Sbjct: 213 VESLKEDLLCLKKNHEEEVNLLREQLGDRLSVELDTA-PTLDLNRVLDEMRCQ 264
>BC130396-1|AAI30397.1| 431|Homo sapiens keratin 40 protein.
Length = 431
Score = 30.7 bits (66), Expect = 4.9
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Frame = +1
Query: 274 AEEENYKMYMDS--LQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPRQMS 447
AE + +D+ L +S+Y +++S+ QL +A SSL+ GI+ L S +
Sbjct: 155 AENSRLAVQLDNCKLATDDFKSKYESELSLRQLLEADISSLH--GILEELTLCKSDLEAH 212
Query: 448 TLMLKTNHLSRSLNFNETIHPQRDEIDLHQNLRHEEALRNLDVTLFRNELELQ 606
LK + L N E ++ R+++ ++ + A LD+ +E+ Q
Sbjct: 213 VESLKEDLLCLKKNHEEEVNLLREQLGDRLSVELDTA-PTLDLNRVLDEMRCQ 264
>AF272390-1|AAF78783.1| 1742|Homo sapiens myosin 5c protein.
Length = 1742
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +1
Query: 436 RQMSTLMLKTNHLSRSLNFNETIHPQRDEIDLHQNLRHEE---ALRNLDVTLFRNELELQ 606
+++ L K HLS+ +N + + R+E D+++++RHE N+ + F+ ++
Sbjct: 1164 KEIEALNFKVVHLSQEINHLQKLF--REENDINESIRHEVTRLTSENMMIPDFKQQISEL 1221
Query: 607 NNLSQALVQNLSEQ 648
Q L L+EQ
Sbjct: 1222 EKQKQDLEIRLNEQ 1235
>U57592-1|AAC50822.1| 1266|Homo sapiens jumonji putative protein
protein.
Length = 1266
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/80 (22%), Positives = 35/80 (43%)
Frame = +1
Query: 172 VRLVVVTEKN*RQLSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSLQKHQLESEYHTQI 351
+R+ ++ +L ++ L D + EEH E+ M + L+K + E HT+
Sbjct: 684 LRIPKTAQERLAKLQEAYCQYILSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTEN 743
Query: 352 SMEQLHQAMQSSLNNSGIVH 411
+ H + N G++H
Sbjct: 744 DHHKFHPLPRLEPKN-GLIH 762
>AF161352-1|AAF28912.1| 290|Homo sapiens HSPC089 protein.
Length = 290
Score = 30.3 bits (65), Expect = 6.5
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +1
Query: 436 RQMSTLMLKTNHLSRSLNFNETIHPQRDEIDLHQNLRHEE---ALRNLDVTLFRNELELQ 606
+++ L K HLS+ +N + + R+E D+++++RHE N+ + F+ ++
Sbjct: 217 KEIEALNFKVVHLSQEINHLQKLF--REENDINESIRHEVTRLTSENMMIPDFKQQIPEL 274
Query: 607 NNLSQALVQNLSEQ 648
Q L L+EQ
Sbjct: 275 EKQKQDLEIRLNEQ 288
>BC038118-1|AAH38118.1| 647|Homo sapiens TMC5 protein protein.
Length = 647
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 396 VVQRGLHSLMQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMF 265
V+ G ++ + HGN G + QL ++ T+ FF ++F
Sbjct: 143 VMYYGFYTNSTIQHGNSGASYNMQLAYIFTIGACLTTCFFSLLF 186
>BC027602-1|AAH27602.1| 760|Homo sapiens transmembrane channel-like
5 protein.
Length = 760
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 396 VVQRGLHSLMQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMF 265
V+ G ++ + HGN G + QL ++ T+ FF ++F
Sbjct: 256 VMYYGFYTNSTIQHGNSGASYNMQLAYIFTIGACLTTCFFSLLF 299
>AY358155-1|AAQ88522.1| 948|Homo sapiens SAYY8238 protein.
Length = 948
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 396 VVQRGLHSLMQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMF 265
V+ G ++ + HGN G + QL ++ T+ FF ++F
Sbjct: 502 VMYYGFYTNSTIQHGNSGASYNMQLAYIFTIGACLTTCFFSLLF 545
>AY263164-1|AAP78779.1| 760|Homo sapiens TMC5 protein protein.
Length = 760
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 396 VVQRGLHSLMQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMF 265
V+ G ++ + HGN G + QL ++ T+ FF ++F
Sbjct: 256 VMYYGFYTNSTIQHGNSGASYNMQLAYIFTIGACLTTCFFSLLF 299
>AY236494-1|AAP69872.1| 760|Homo sapiens transmembrane channel-like
protein 5 protein.
Length = 760
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 396 VVQRGLHSLMQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMF 265
V+ G ++ + HGN G + QL ++ T+ FF ++F
Sbjct: 256 VMYYGFYTNSTIQHGNSGASYNMQLAYIFTIGACLTTCFFSLLF 299
>AL357148-2|CAI16568.1| 1460|Homo sapiens ankyrin repeat domain 30A
protein.
Length = 1460
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +1
Query: 376 MQSSLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFNETI--HPQRDEIDLHQNLRH 549
+ S++ N+ ++H L + R+ +L + N+ +L N + H QRD+ + ++
Sbjct: 1302 VSSTIYNNEVLHQ-PLSEAQRKSKSLKINLNYAGDALRENTLVSEHAQRDQRETQCQMKE 1360
Query: 550 EEALRNLDVTLFRNELELQNNLSQALVQ 633
E + + E Q +L Q L Q
Sbjct: 1361 AEHMYQNEQDNVNKHTEQQESLDQKLFQ 1388
>AL357148-1|CAI16567.1| 1341|Homo sapiens breast cancer antigen
NY-BR-1 protein.
Length = 1341
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +1
Query: 376 MQSSLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFNETI--HPQRDEIDLHQNLRH 549
+ S++ N+ ++H L + R+ +L + N+ +L N + H QRD+ + ++
Sbjct: 1183 VSSTIYNNEVLHQ-PLSEAQRKSKSLKINLNYAGDALRENTLVSEHAQRDQRETQCQMKE 1241
Query: 550 EEALRNLDVTLFRNELELQNNLSQALVQ 633
E + + E Q +L Q L Q
Sbjct: 1242 AEHMYQNEQDNVNKHTEQQESLDQKLFQ 1269
>AL157387-4|CAH71319.1| 1460|Homo sapiens ankyrin repeat domain 30A
protein.
Length = 1460
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +1
Query: 376 MQSSLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFNETI--HPQRDEIDLHQNLRH 549
+ S++ N+ ++H L + R+ +L + N+ +L N + H QRD+ + ++
Sbjct: 1302 VSSTIYNNEVLHQ-PLSEAQRKSKSLKINLNYAGDALRENTLVSEHAQRDQRETQCQMKE 1360
Query: 550 EEALRNLDVTLFRNELELQNNLSQALVQ 633
E + + E Q +L Q L Q
Sbjct: 1361 AEHMYQNEQDNVNKHTEQQESLDQKLFQ 1388
>AL157387-3|CAH71320.1| 1341|Homo sapiens breast cancer antigen
NY-BR-1 protein.
Length = 1341
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +1
Query: 376 MQSSLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFNETI--HPQRDEIDLHQNLRH 549
+ S++ N+ ++H L + R+ +L + N+ +L N + H QRD+ + ++
Sbjct: 1183 VSSTIYNNEVLHQ-PLSEAQRKSKSLKINLNYAGDALRENTLVSEHAQRDQRETQCQMKE 1241
Query: 550 EEALRNLDVTLFRNELELQNNLSQALVQ 633
E + + E Q +L Q L Q
Sbjct: 1242 AEHMYQNEQDNVNKHTEQQESLDQKLFQ 1269
>AJ786658-1|CAH10353.1| 431|Homo sapiens Ka36 protein protein.
Length = 431
Score = 29.9 bits (64), Expect = 8.5
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +1
Query: 274 AEEENYKMYMDS--LQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPRQMS 447
AE + +D+ L +S+Y +++S+ QL +A SSL+ GI+ L S +
Sbjct: 155 AENSRLAVQLDNCKLATDDFKSKYESELSLRQLLEADISSLH--GILEELTLCKSDLEAH 212
Query: 448 TLMLKTNHLSRSLNFNETIHPQRDEI 525
LK + L N E ++ R+++
Sbjct: 213 VESLKEDLLCLKKNHEEEVNLLREQL 238
>AF269087-1|AAK27325.1| 1341|Homo sapiens breast cancer antigen
NY-BR-1 protein.
Length = 1341
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +1
Query: 376 MQSSLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFNETI--HPQRDEIDLHQNLRH 549
+ S++ N+ ++H L + R+ +L + N+ +L N + H QRD+ + ++
Sbjct: 1183 VSSTIYNNEVLHQ-PLSEAQRKSKSLKINLNYAGDALRENTLVSEHAQRDQRETQCQMKE 1241
Query: 550 EEALRNLDVTLFRNELELQNNLSQALVQ 633
E + + E Q +L Q L Q
Sbjct: 1242 AEHMYQNEQDNVNKHTEQQESLDQKLFQ 1269
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,214,573
Number of Sequences: 237096
Number of extensions: 1704940
Number of successful extensions: 3654
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3654
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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