Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18d14
(710 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 244 2e-64
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 244 2e-64
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 244 2e-64
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 244 2e-64
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 244 2e-64
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 244 2e-64
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 244 2e-64
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 244 2e-64
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 243 4e-64
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 228 1e-59
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 136 1e-31
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 126 8e-29
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 49 1e-05
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 49 1e-05
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 49 1e-05
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 49 1e-05
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 49 1e-05
AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf... 33 1.3
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr... 33 1.3
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr... 33 1.3
AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein. 33 1.3
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 244 bits (597), Expect = 2e-64
Identities = 116/129 (89%), Positives = 125/129 (96%)
Frame = +2
Query: 71 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 250
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 251 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 430
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 431 ILIRQRHIR 457
+LIRQRHIR
Sbjct: 128 VLIRQRHIR 136
Score = 70.9 bits (166), Expect = 4e-12
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1
Query: 601 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGXRPGRV 708
RKQVVNIPSFIVRLDS KHIDFSL+SP+GG RPGRV
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRV 173
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 244 bits (597), Expect = 2e-64
Identities = 116/129 (89%), Positives = 125/129 (96%)
Frame = +2
Query: 71 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 250
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 251 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 430
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 431 ILIRQRHIR 457
+LIRQRHIR
Sbjct: 128 VLIRQRHIR 136
Score = 70.9 bits (166), Expect = 4e-12
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1
Query: 601 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGXRPGRV 708
RKQVVNIPSFIVRLDS KHIDFSL+SP+GG RPGRV
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRV 173
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 244 bits (597), Expect = 2e-64
Identities = 116/129 (89%), Positives = 125/129 (96%)
Frame = +2
Query: 71 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 250
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 251 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 430
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 431 ILIRQRHIR 457
+LIRQRHIR
Sbjct: 128 VLIRQRHIR 136
Score = 70.9 bits (166), Expect = 4e-12
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1
Query: 601 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGXRPGRV 708
RKQVVNIPSFIVRLDS KHIDFSL+SP+GG RPGRV
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRV 173
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 244 bits (597), Expect = 2e-64
Identities = 116/129 (89%), Positives = 125/129 (96%)
Frame = +2
Query: 71 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 250
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 251 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 430
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 431 ILIRQRHIR 457
+LIRQRHIR
Sbjct: 128 VLIRQRHIR 136
Score = 70.9 bits (166), Expect = 4e-12
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1
Query: 601 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGXRPGRV 708
RKQVVNIPSFIVRLDS KHIDFSL+SP+GG RPGRV
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRV 173
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 244 bits (597), Expect = 2e-64
Identities = 116/129 (89%), Positives = 125/129 (96%)
Frame = +2
Query: 71 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 250
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 251 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 430
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 431 ILIRQRHIR 457
+LIRQRHIR
Sbjct: 128 VLIRQRHIR 136
Score = 70.9 bits (166), Expect = 4e-12
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1
Query: 601 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGXRPGRV 708
RKQVVNIPSFIVRLDS KHIDFSL+SP+GG RPGRV
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRV 173
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 244 bits (597), Expect = 2e-64
Identities = 116/129 (89%), Positives = 125/129 (96%)
Frame = +2
Query: 71 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 250
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 251 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 430
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 431 ILIRQRHIR 457
+LIRQRHIR
Sbjct: 128 VLIRQRHIR 136
Score = 70.9 bits (166), Expect = 4e-12
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1
Query: 601 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGXRPGRV 708
RKQVVNIPSFIVRLDS KHIDFSL+SP+GG RPGRV
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRV 173
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 244 bits (597), Expect = 2e-64
Identities = 116/129 (89%), Positives = 125/129 (96%)
Frame = +2
Query: 71 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 250
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 251 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 430
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 431 ILIRQRHIR 457
+LIRQRHIR
Sbjct: 128 VLIRQRHIR 136
Score = 70.9 bits (166), Expect = 4e-12
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1
Query: 601 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGXRPGRV 708
RKQVVNIPSFIVRLDS KHIDFSL+SP+GG RPGRV
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRV 173
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 244 bits (597), Expect = 2e-64
Identities = 116/129 (89%), Positives = 125/129 (96%)
Frame = +2
Query: 71 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 250
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 251 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 430
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 431 ILIRQRHIR 457
+LIRQRHIR
Sbjct: 128 VLIRQRHIR 136
Score = 70.9 bits (166), Expect = 4e-12
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1
Query: 601 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGXRPGRV 708
RKQVVNIPSFIVRLDS KHIDFSL+SP+GG RPGRV
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRV 173
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 243 bits (595), Expect = 4e-64
Identities = 115/129 (89%), Positives = 125/129 (96%)
Frame = +2
Query: 71 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 250
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 251 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 430
P+RLFEGNALLRRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 431 ILIRQRHIR 457
+LIRQRHIR
Sbjct: 128 VLIRQRHIR 136
Score = 65.3 bits (152), Expect = 2e-10
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 601 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGXRPGRV 708
RKQVVNIPSFIVRLDS KHIDFSL+SP G RPGRV
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRV 173
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 228 bits (558), Expect = 1e-59
Identities = 110/129 (85%), Positives = 120/129 (93%)
Frame = +2
Query: 71 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 250
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 251 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 430
P+RLFEGNALL RLV IGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 431 ILIRQRHIR 457
+LIRQRH R
Sbjct: 128 VLIRQRHFR 136
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = +1
Query: 601 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGXRPGRV 708
RKQVVNIPSFIVRLDS KHIDFSL SP+GG RPGRV
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRV 173
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 136 bits (328), Expect = 1e-31
Identities = 64/71 (90%), Positives = 69/71 (97%)
Frame = +2
Query: 245 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 424
+DP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 425 ARILIRQRHIR 457
AR+LIRQRHIR
Sbjct: 65 ARVLIRQRHIR 75
Score = 60.5 bits (140), Expect = 6e-09
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +1
Query: 601 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGG 690
RKQVVNIPSFIVRLDS KHIDFSL+SP+GG
Sbjct: 77 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGG 106
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 126 bits (304), Expect = 8e-29
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = +2
Query: 80 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 259
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61
Query: 260 LFE 268
LFE
Sbjct: 62 LFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 49.2 bits (112), Expect = 1e-05
Identities = 30/109 (27%), Positives = 53/109 (48%)
Frame = +2
Query: 131 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 310
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 311 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 457
+ L+ + F RRL T + K +A+ + A + Q H+R
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVR 137
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 49.2 bits (112), Expect = 1e-05
Identities = 30/109 (27%), Positives = 53/109 (48%)
Frame = +2
Query: 131 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 310
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 311 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 457
+ L+ + F RRL T + K +A+ + A + Q H+R
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVR 137
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 49.2 bits (112), Expect = 1e-05
Identities = 30/109 (27%), Positives = 53/109 (48%)
Frame = +2
Query: 131 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 310
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 311 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 457
+ L+ + F RRL T + K +A+ + A + Q H+R
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVR 137
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 49.2 bits (112), Expect = 1e-05
Identities = 30/109 (27%), Positives = 53/109 (48%)
Frame = +2
Query: 131 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 310
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 311 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 457
+ L+ + F RRL T + K +A+ + A + Q H+R
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVR 137
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 49.2 bits (112), Expect = 1e-05
Identities = 30/109 (27%), Positives = 53/109 (48%)
Frame = +2
Query: 131 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 310
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 311 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 457
+ L+ + F RRL T + K +A+ + A + Q H+R
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVR 137
>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
A protein.
Length = 2595
Score = 32.7 bits (71), Expect = 1.3
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -1
Query: 269 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQGVP---F 111
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 110 QKDDEVSRTSLKIPTVL 60
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2277
Score = 32.7 bits (71), Expect = 1.3
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -1
Query: 269 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQGVP---F 111
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 680 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 738
Query: 110 QKDDEVSRTSLKIPTVL 60
KD+ ++ S +P VL
Sbjct: 739 MKDNFLTSVSYSLPIVL 755
>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2347
Score = 32.7 bits (71), Expect = 1.3
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -1
Query: 269 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQGVP---F 111
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 750 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 808
Query: 110 QKDDEVSRTSLKIPTVL 60
KD+ ++ S +P VL
Sbjct: 809 MKDNFLTSVSYSLPIVL 825
>AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.
Length = 2413
Score = 32.7 bits (71), Expect = 1.3
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -1
Query: 269 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQGVP---F 111
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 110 QKDDEVSRTSLKIPTVL 60
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,030,756
Number of Sequences: 237096
Number of extensions: 2171994
Number of successful extensions: 4800
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4795
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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