Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18d09
         (587 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14 pro...   169   8e-42
BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14 p...   169   8e-42
BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14 p...   169   8e-42
BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14 p...   169   8e-42
BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14 p...   169   8e-42
BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14 p...   169   8e-42
BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal pr...   157   3e-38
U64791-1|AAB06460.1| 1179|Homo sapiens Golgi membrane sialoglyco...    32   1.7  
U28811-1|AAB02178.1| 1177|Homo sapiens cysteine-rich fibroblast ...    32   1.7  
BC060822-1|AAH60822.1| 1203|Homo sapiens golgi apparatus protein...    32   1.7  

>M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  169 bits (410), Expect = 8e-42
 Identities = 81/99 (81%), Positives = 87/99 (87%)
 Frame = +3

Query: 213 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 392
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 393 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 509
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99


>BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  169 bits (410), Expect = 8e-42
 Identities = 81/99 (81%), Positives = 87/99 (87%)
 Frame = +3

Query: 213 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 392
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 393 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 509
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99


>BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  169 bits (410), Expect = 8e-42
 Identities = 81/99 (81%), Positives = 87/99 (87%)
 Frame = +3

Query: 213 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 392
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 393 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 509
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99


>BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  169 bits (410), Expect = 8e-42
 Identities = 81/99 (81%), Positives = 87/99 (87%)
 Frame = +3

Query: 213 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 392
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 393 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 509
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99


>BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  169 bits (410), Expect = 8e-42
 Identities = 81/99 (81%), Positives = 87/99 (87%)
 Frame = +3

Query: 213 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 392
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 393 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 509
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99


>BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  169 bits (410), Expect = 8e-42
 Identities = 81/99 (81%), Positives = 87/99 (87%)
 Frame = +3

Query: 213 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 392
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 393 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 509
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99


>BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal
           protein S14 protein.
          Length = 170

 Score =  157 bits (381), Expect = 3e-38
 Identities = 75/99 (75%), Positives = 82/99 (82%)
 Frame = +3

Query: 213 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 392
           MAP K K  KEE  + LGPQ   GE VFGV HIFASFNDTFVHVTDLSG++TI RVTGGM
Sbjct: 1   MAPGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTGGM 60

Query: 393 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 509
           KVKADRDE+SPYAAML  QDVA++CK LGI ALHI+LRA
Sbjct: 61  KVKADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRA 99


>U64791-1|AAB06460.1| 1179|Homo sapiens Golgi membrane
           sialoglycoprotein MG160 protein.
          Length = 1179

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 265 PRVTWTSSLATLFFLGAMAQPENNIFNTCN 176
           P+ TW+++LA L  L  + +PEN I + CN
Sbjct: 127 PKHTWSNNLAVLECLQDVREPENEISSDCN 156


>U28811-1|AAB02178.1| 1177|Homo sapiens cysteine-rich fibroblast
           growth factor receptor protein.
          Length = 1177

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 265 PRVTWTSSLATLFFLGAMAQPENNIFNTCN 176
           P+ TW+++LA L  L  + +PEN I + CN
Sbjct: 126 PKHTWSNNLAVLECLQDVREPENEISSDCN 155


>BC060822-1|AAH60822.1| 1203|Homo sapiens golgi apparatus protein 1
           protein.
          Length = 1203

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 265 PRVTWTSSLATLFFLGAMAQPENNIFNTCN 176
           P+ TW+++LA L  L  + +PEN I + CN
Sbjct: 127 PKHTWSNNLAVLECLQDVREPENEISSDCN 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,034,096
Number of Sequences: 237096
Number of extensions: 1859758
Number of successful extensions: 4167
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4161
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)