Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18d06
         (441 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.7  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   3.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.9  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    20   9.1  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    20   9.1  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    20   9.1  

>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 167 ADRDIWPIVLHAIFGTLARIFSSCG 241
           A + +WP  L AI+G+L  + +  G
Sbjct: 205 AAKHMWPADLEAIYGSLKNLNTDHG 229


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 167 ADRDIWPIVLHAIFGTLARIFSSCG 241
           A + +WP  L AI+G+L  + +  G
Sbjct: 205 AAKHMWPADLEAIYGSLKNLNTDHG 229


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 289 PSAFPIMYPIISPLGD 242
           P  FP+  P+ SP GD
Sbjct: 188 PGVFPVDAPMHSPPGD 203


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 289 PSAFPIMYPIISPLGDSTT*KYSG 218
           P   P+  P++   G STT   SG
Sbjct: 90  PEPAPLASPLVQEPGSSTTSATSG 113


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 207 NIACKTIGHMSLSAGLDSHC 148
           +I CK +   S+ A LDS C
Sbjct: 50  DIQCKGVYDKSIFAKLDSIC 69


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 207 NIACKTIGHMSLSAGLDSHC 148
           +I CK +   S+ A LDS C
Sbjct: 50  DIQCKGVYDKSIFAKLDSIC 69


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 207 NIACKTIGHMSLSAGLDSHC 148
           +I CK +   S+ A LDS C
Sbjct: 50  DIQCKGVYDKSIFAKLDSIC 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,538
Number of Sequences: 336
Number of extensions: 1975
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)