Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18c23
(326 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 29 0.60
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 29 0.60
AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical ... 29 0.79
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 28 1.8
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical pr... 27 4.2
U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase ... 27 4.2
AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical ... 27 4.2
AF497825-1|AAM18103.1| 670|Caenorhabditis elegans putative Na-H... 27 4.2
AF016447-15|AAR30208.1| 651|Caenorhabditis elegans Na/h exchang... 27 4.2
AF016447-14|AAG24015.2| 670|Caenorhabditis elegans Na/h exchang... 27 4.2
U64859-1|AAC69092.2| 468|Caenorhabditis elegans Hypothetical pr... 26 5.6
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 26 5.6
AF024501-11|AAB70366.2| 443|Caenorhabditis elegans Hypothetical... 26 7.4
Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z75546-1|CAA99889.1| 546|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z48045-1|CAA88103.2| 630|Caenorhabditis elegans Hypothetical pr... 25 9.7
U40409-5|AAL27247.1| 589|Caenorhabditis elegans Activator of g ... 25 9.7
U40409-4|AAA81387.1| 579|Caenorhabditis elegans Activator of g ... 25 9.7
D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese super... 25 9.7
D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese super... 25 9.7
AF408756-1|AAO27835.1| 280|Caenorhabditis elegans AGS3.1 protein. 25 9.7
AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transpor... 25 9.7
AC006772-2|AAF60609.2| 341|Caenorhabditis elegans Hypothetical ... 25 9.7
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 29.5 bits (63), Expect = 0.60
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 32 PTGPSNTGTPSIIIGTLPSFSLISSQDRLLQSKPLPMKP 148
PT SN +PS I+G+ P I LL ++P +P
Sbjct: 454 PTSTSNPSSPSPIMGSAPPTGSILPSANLLSAEPTTCEP 492
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 29.5 bits (63), Expect = 0.60
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 32 PTGPSNTGTPSIIIGTLPSFSLISSQDRLLQSKPLPMKP 148
PT SN +PS I+G+ P I LL ++P +P
Sbjct: 454 PTSTSNPSSPSPIMGSAPPTGSILPSANLLSAEPTTCEP 492
>AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical
protein Y51H1A.2 protein.
Length = 604
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 44 SNTGTPSIIIGTLPSFSLISSQDRLLQSKPLPMKPLI 154
+N+ PS I GT+P+ S D LLQ + P+ I
Sbjct: 410 ANSDLPSTIFGTVPNDVAFSPDDELLQLQSKPISTTI 446
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 46 QHRDTINYYRDAAKLLTDKLTGQTATVQALTNEAADLVRTMN 171
Q+RD +Y L DK+T TA NEA +R ++
Sbjct: 1110 QYRDCETFYSKEMDRLNDKITEITAEKNRQKNEAQKTIRVLS 1151
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 46 QHRDTINYYRDAAKLLTDKLTGQTATVQALTNEAADLVRTMN 171
Q+RD +Y L DK+T TA NEA +R ++
Sbjct: 1110 QYRDCETFYSKEMDRLNDKITEITAEKNRQKNEAQKTIRVLS 1151
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 46 QHRDTINYYRDAAKLLTDKLTGQTATVQALTNEAADLVRTMN 171
Q+RD +Y L DK+T TA NEA +R ++
Sbjct: 1110 QYRDCETFYSKEMDRLNDKITEITAEKNRQKNEAQKTIRVLS 1151
>Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical
protein F57F5.5 protein.
Length = 707
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 174 CIHCSN*ISGFIGKGLDCSSLSCEL 100
C HC + + G I +GL CS +C+L
Sbjct: 262 CDHCGSMLYGLINQGLQCS--TCKL 284
>Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical
protein F57F5.5 protein.
Length = 707
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 174 CIHCSN*ISGFIGKGLDCSSLSCEL 100
C HC + + G I +GL CS +C+L
Sbjct: 262 CDHCGSMLYGLINQGLQCS--TCKL 284
>U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase C
protein.
Length = 707
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 174 CIHCSN*ISGFIGKGLDCSSLSCEL 100
C HC + + G I +GL CS +C+L
Sbjct: 262 CDHCGSMLYGLINQGLQCS--TCKL 284
>AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical
protein Y51H1A.7 protein.
Length = 354
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 49 HRDTINYYRDAAKLLTDKLTGQTATVQALTNEAA---DLVRTMNAG 177
H DTIN+ RD A + + + A V+ N A D+ R M AG
Sbjct: 86 HTDTINHLRDMASYVVELVCQIDAEVKVRRNPALRIDDVKRDMIAG 131
>AF497825-1|AAM18103.1| 670|Caenorhabditis elegans putative Na-H
exchanger isoform 3 protein.
Length = 670
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -1
Query: 269 SLGIIGKSYKSSGFRSTMGIRVLGPGWYPEDPAFIVLTRSAASLVRAWTVAVC 111
++GII S + T GI++L P + P LT SL +AVC
Sbjct: 247 AIGIIFAIATSLATKYTQGIKILAPVFIFLLPYMAYLTAEMVSLSSIIAIAVC 299
>AF016447-15|AAR30208.1| 651|Caenorhabditis elegans Na/h exchanger
protein 3, isoform b protein.
Length = 651
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -1
Query: 269 SLGIIGKSYKSSGFRSTMGIRVLGPGWYPEDPAFIVLTRSAASLVRAWTVAVC 111
++GII S + T GI++L P + P LT SL +AVC
Sbjct: 228 AIGIIFAIATSLATKYTQGIKILAPVFIFLLPYMAYLTAEMVSLSSIIAIAVC 280
>AF016447-14|AAG24015.2| 670|Caenorhabditis elegans Na/h exchanger
protein 3, isoform a protein.
Length = 670
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -1
Query: 269 SLGIIGKSYKSSGFRSTMGIRVLGPGWYPEDPAFIVLTRSAASLVRAWTVAVC 111
++GII S + T GI++L P + P LT SL +AVC
Sbjct: 247 AIGIIFAIATSLATKYTQGIKILAPVFIFLLPYMAYLTAEMVSLSSIIAIAVC 299
>U64859-1|AAC69092.2| 468|Caenorhabditis elegans Hypothetical
protein R09F10.3 protein.
Length = 468
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 219 GRSKPGRLIRLTYYPKTNFHNNPQKDNYCYFLLKK 323
G + GR + T P+T FH+ ++ N C FL++K
Sbjct: 116 GTTATGR-VSPTIPPETLFHDAIKRCNNCLFLIRK 149
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 78 VPIIIDGVPVLDGP 37
V +IIDGVP+ DGP
Sbjct: 1884 VEVIIDGVPLSDGP 1897
>AF024501-11|AAB70366.2| 443|Caenorhabditis elegans Hypothetical
protein F39E9.1 protein.
Length = 443
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 266 LGIIGKS-YKSSGFRSTMGIRVLGPGWYPEDPAFIVLTRSAASLVR 132
L ++ K +K S +GI LGP W+ +I L+ ++R
Sbjct: 83 LAVLTKQVFKKSWITKILGIDFLGPKWFKTAIFYISLSNCDPQIIR 128
>Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical
protein F10D11.1 protein.
Length = 221
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 173 QDPLDTTQGLVPL 211
QDPL+ T GLVPL
Sbjct: 166 QDPLEATTGLVPL 178
>Z75546-1|CAA99889.1| 546|Caenorhabditis elegans Hypothetical
protein R05D11.1 protein.
Length = 546
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 153 ISGFIGKGLDCSSLSCELISEKLGSVPIIIDGV 55
+ G IGKG+ L+ E+ E L ++P+ + +
Sbjct: 407 VRGLIGKGVRFYLLAGEVYVENLCNIPVFVQSI 439
>Z48045-1|CAA88103.2| 630|Caenorhabditis elegans Hypothetical
protein C41C4.3 protein.
Length = 630
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -3
Query: 117 SLSCELISEKLGSVPIIIDGVPVLDGP 37
S+ C+ I++K +VP+I+D +P + P
Sbjct: 438 SMQCQ-INQKASTVPVILDKMPDVSKP 463
>U40409-5|AAL27247.1| 589|Caenorhabditis elegans Activator of g
protein signallingprotein 3, isoform b protein.
Length = 589
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 237 RLIRLTYYPKTNFHNNP 287
R +RLTY+ K N H+ P
Sbjct: 395 RELRLTYFQKRNIHDKP 411
>U40409-4|AAA81387.1| 579|Caenorhabditis elegans Activator of g
protein signallingprotein 3, isoform a protein.
Length = 579
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 237 RLIRLTYYPKTNFHNNP 287
R +RLTY+ K N H+ P
Sbjct: 385 RELRLTYFQKRNIHDKP 401
>D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 221
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 173 QDPLDTTQGLVPL 211
QDPL+ T GLVPL
Sbjct: 166 QDPLEATTGLVPL 178
>D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese
superoxide dismutaseprecursor protein.
Length = 221
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 173 QDPLDTTQGLVPL 211
QDPL+ T GLVPL
Sbjct: 166 QDPLEATTGLVPL 178
>AF408756-1|AAO27835.1| 280|Caenorhabditis elegans AGS3.1 protein.
Length = 280
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 237 RLIRLTYYPKTNFHNNP 287
R +RLTY+ K N H+ P
Sbjct: 86 RELRLTYFQKRNIHDKP 102
>AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transporter
(pgp related)protein 6 protein.
Length = 668
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 91 LTDKLTGQTATVQALTNEAADLVRTMNA 174
L+ + GQ+AT A+++EA +RT+ A
Sbjct: 272 LSRRAQGQSATASAVSDEALTNIRTIRA 299
>AC006772-2|AAF60609.2| 341|Caenorhabditis elegans Hypothetical
protein Y46D2A.1 protein.
Length = 341
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 29 MPTGPSNTGTPSIIIGTLPSFSLISS 106
+P G S TPS + T+PS + IS+
Sbjct: 294 LPPGTSTPSTPSTVETTMPSTTRIST 319
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,419,194
Number of Sequences: 27780
Number of extensions: 139749
Number of successful extensions: 401
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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